Gene : Araha.32129s0001 A. halleri v1.1

Defline:  (1 of 2) PTHR11588:SF7 - TUBULIN GAMMA CHAIN Genomic Order:  1
Name:  ? Araha.32129s0001 Secondary Identifier:  ? PAC:28838866

Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY0-1296 Arabidopsis halleri pathologic  
Ahalleri PWY-5695 Arabidopsis halleri pathologic  
Ahalleri PWY-6608 Arabidopsis halleri pathologic  
Ahalleri PWY-6609 Arabidopsis halleri pathologic  
Ahalleri PWY-7179 Arabidopsis halleri pathologic  
Ahalleri SALVADEHYPOX-PWY Arabidopsis halleri pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.32129s0001 0.5kb upstream 0.5kb upstream 1682 true Scaffold32129: 1-1682 Arabidopsis halleri
Araha.32129s0001 0.5kb upstream 0.5kb upstream 13 false Scaffold32129: 1-13 Arabidopsis halleri
Araha.32129s0001 0.5kb downstream 0.5kb downstream 1756 true Scaffold32129: 14-1769 Arabidopsis halleri
Araha.32129s0001 0.5kb downstream 0.5kb downstream 87 false Scaffold32129: 1683-1769 Arabidopsis halleri
Araha.32129s0001 1.0kb upstream 1.0kb upstream 1682 true Scaffold32129: 1-1682 Arabidopsis halleri
Araha.32129s0001 1.0kb upstream 1.0kb upstream 13 false Scaffold32129: 1-13 Arabidopsis halleri
Araha.32129s0001 1.0kb downstream 1.0kb downstream 1756 true Scaffold32129: 14-1769 Arabidopsis halleri
Araha.32129s0001 1.0kb downstream 1.0kb downstream 87 false Scaffold32129: 1683-1769 Arabidopsis halleri
Araha.32129s0001 2.0kb upstream 2.0kb upstream 1682 true Scaffold32129: 1-1682 Arabidopsis halleri
Araha.32129s0001 2.0kb upstream 2.0kb upstream 13 false Scaffold32129: 1-13 Arabidopsis halleri
Araha.32129s0001 2.0kb downstream 2.0kb downstream 1756 true Scaffold32129: 14-1769 Arabidopsis halleri
Araha.32129s0001 2.0kb downstream 2.0kb downstream 87 false Scaffold32129: 1683-1769 Arabidopsis halleri
Araha.32129s0001 5.0kb upstream 5.0kb upstream 1682 true Scaffold32129: 1-1682 Arabidopsis halleri
Araha.32129s0001 5.0kb upstream 5.0kb upstream 13 false Scaffold32129: 1-13 Arabidopsis halleri
Araha.32129s0001 5.0kb downstream 5.0kb downstream 1756 true Scaffold32129: 14-1769 Arabidopsis halleri
Araha.32129s0001 5.0kb downstream 5.0kb downstream 87 false Scaffold32129: 1683-1769 Arabidopsis halleri
Araha.32129s0001 10.0kb upstream 10.0kb upstream 1682 true Scaffold32129: 1-1682 Arabidopsis halleri
Araha.32129s0001 10.0kb upstream 10.0kb upstream 13 false Scaffold32129: 1-13 Arabidopsis halleri
Araha.32129s0001 10.0kb downstream 10.0kb downstream 1756 true Scaffold32129: 14-1769 Arabidopsis halleri
Araha.32129s0001 10.0kb downstream 10.0kb downstream 87 false Scaffold32129: 1683-1769 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380888 5261 Brassicaceae View MSA
123836063 5264 Brassicales-Malvales View MSA
124337609 5266 SBM View MSA
124248076 5268 Malvidae View MSA
124064606 5270 Rosid View MSA
123746134 5271 Pentapetalae View MSA
122785812 5272 Eudicot View MSA
122042290 5273 Angiosperm View MSA
121346688 5274 Embryophyte View MSA
123428620 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain