Gene : Araha.9394s0006 A. halleri v1.1

Defline:  (1 of 2) PTHR14009:SF9 - LETM1-LIKE PROTEIN Genomic Order:  6
Name:  ? Araha.9394s0006 Secondary Identifier:  ? PAC:28860669

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.9394s0006 0.5kb upstream 0.5kb upstream 6607 true Scaffold9394: 12223-18829 Arabidopsis halleri
Araha.9394s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold9394: 12223-12722 Arabidopsis halleri
Araha.9394s0006 0.5kb downstream 0.5kb downstream 6607 true Scaffold9394: 12723-19329 Arabidopsis halleri
Araha.9394s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold9394: 18830-19329 Arabidopsis halleri
Araha.9394s0006 1.0kb upstream 1.0kb upstream 7107 true Scaffold9394: 11723-18829 Arabidopsis halleri
Araha.9394s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold9394: 11723-12722 Arabidopsis halleri
Araha.9394s0006 1.0kb downstream 1.0kb downstream 7107 true Scaffold9394: 12723-19829 Arabidopsis halleri
Araha.9394s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold9394: 18830-19829 Arabidopsis halleri
Araha.9394s0006 2.0kb upstream 2.0kb upstream 8107 true Scaffold9394: 10723-18829 Arabidopsis halleri
Araha.9394s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold9394: 10723-12722 Arabidopsis halleri
Araha.9394s0006 2.0kb downstream 2.0kb downstream 8107 true Scaffold9394: 12723-20829 Arabidopsis halleri
Araha.9394s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold9394: 18830-20829 Arabidopsis halleri
Araha.9394s0006 5.0kb upstream 5.0kb upstream 11107 true Scaffold9394: 7723-18829 Arabidopsis halleri
Araha.9394s0006 5.0kb upstream 5.0kb upstream 5000 false Scaffold9394: 7723-12722 Arabidopsis halleri
Araha.9394s0006 5.0kb downstream 5.0kb downstream 8689 true Scaffold9394: 12723-21411 Arabidopsis halleri
Araha.9394s0006 5.0kb downstream 5.0kb downstream 2582 false Scaffold9394: 18830-21411 Arabidopsis halleri
Araha.9394s0006 10.0kb upstream 10.0kb upstream 16107 true Scaffold9394: 2723-18829 Arabidopsis halleri
Araha.9394s0006 10.0kb upstream 10.0kb upstream 10000 false Scaffold9394: 2723-12722 Arabidopsis halleri
Araha.9394s0006 10.0kb downstream 10.0kb downstream 8689 true Scaffold9394: 12723-21411 Arabidopsis halleri
Araha.9394s0006 10.0kb downstream 10.0kb downstream 2582 false Scaffold9394: 18830-21411 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374069 5261 Brassicaceae View MSA
123837098 5264 Brassicales-Malvales View MSA
124338859 5266 SBM View MSA
124237079 5268 Malvidae View MSA
124063652 5270 Rosid View MSA
123740190 5271 Pentapetalae View MSA
122788808 5272 Eudicot View MSA
122047969 5273 Angiosperm View MSA
121348078 5274 Embryophyte View MSA
123380722 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain