Gene : Araha.31379s0003 A. halleri v1.1
Defline:  (1 of 1) PTHR11946:SF89 - METHIONYL-TRNA SYNTHETASE Genomic Order:  3
Name:  ? Araha.31379s0003 Secondary Identifier:  ? PAC:28848853
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri TRNA-CHARGING-PWY Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.31379s0003 0.5kb upstream 0.5kb upstream 3868 true Scaffold31379: 9538-13405 Arabidopsis halleri
Araha.31379s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold31379: 9538-10037 Arabidopsis halleri
Araha.31379s0003 0.5kb downstream 0.5kb downstream 3868 true Scaffold31379: 10038-13905 Arabidopsis halleri
Araha.31379s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold31379: 13406-13905 Arabidopsis halleri
Araha.31379s0003 1.0kb upstream 1.0kb upstream 4368 true Scaffold31379: 9038-13405 Arabidopsis halleri
Araha.31379s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold31379: 9038-10037 Arabidopsis halleri
Araha.31379s0003 1.0kb downstream 1.0kb downstream 4368 true Scaffold31379: 10038-14405 Arabidopsis halleri
Araha.31379s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold31379: 13406-14405 Arabidopsis halleri
Araha.31379s0003 2.0kb upstream 2.0kb upstream 5368 true Scaffold31379: 8038-13405 Arabidopsis halleri
Araha.31379s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold31379: 8038-10037 Arabidopsis halleri
Araha.31379s0003 2.0kb downstream 2.0kb downstream 5368 true Scaffold31379: 10038-15405 Arabidopsis halleri
Araha.31379s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold31379: 13406-15405 Arabidopsis halleri
Araha.31379s0003 5.0kb upstream 5.0kb upstream 8368 true Scaffold31379: 5038-13405 Arabidopsis halleri
Araha.31379s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold31379: 5038-10037 Arabidopsis halleri
Araha.31379s0003 5.0kb downstream 5.0kb downstream 8368 true Scaffold31379: 10038-18405 Arabidopsis halleri
Araha.31379s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold31379: 13406-18405 Arabidopsis halleri
Araha.31379s0003 10.0kb upstream 10.0kb upstream 13368 true Scaffold31379: 38-13405 Arabidopsis halleri
Araha.31379s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold31379: 38-10037 Arabidopsis halleri
Araha.31379s0003 10.0kb downstream 10.0kb downstream 13368 true Scaffold31379: 10038-23405 Arabidopsis halleri
Araha.31379s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold31379: 13406-23405 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362064 5261 Brassicaceae View MSA
123831392 5264 Brassicales-Malvales View MSA
124342754 5266 SBM View MSA
124242853 5268 Malvidae View MSA
124065458 5270 Rosid View MSA
123752968 5271 Pentapetalae View MSA
122787831 5272 Eudicot View MSA
122046373 5273 Angiosperm View MSA
121347151 5274 Embryophyte View MSA
123428788 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain