Gene : Araha.31379s0002 A. halleri v1.1
Defline:  (1 of 3) 1.2.4.2 - Oxoglutarate dehydrogenase (succinyl-transferring) / Oxoglutarate dehydrogenase (lipoamide) Genomic Order:  2
Name:  ? Araha.31379s0002 Secondary Identifier:  ? PAC:28848858
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-5084 Arabidopsis halleri pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.31379s0002 0.5kb upstream 0.5kb upstream 4648 true Scaffold31379: 4298-8945 Arabidopsis halleri
Araha.31379s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold31379: 8446-8945 Arabidopsis halleri
Araha.31379s0002 0.5kb downstream 0.5kb downstream 4648 true Scaffold31379: 3798-8445 Arabidopsis halleri
Araha.31379s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold31379: 3798-4297 Arabidopsis halleri
Araha.31379s0002 1.0kb upstream 1.0kb upstream 5148 true Scaffold31379: 4298-9445 Arabidopsis halleri
Araha.31379s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold31379: 8446-9445 Arabidopsis halleri
Araha.31379s0002 1.0kb downstream 1.0kb downstream 5148 true Scaffold31379: 3298-8445 Arabidopsis halleri
Araha.31379s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold31379: 3298-4297 Arabidopsis halleri
Araha.31379s0002 2.0kb upstream 2.0kb upstream 6148 true Scaffold31379: 4298-10445 Arabidopsis halleri
Araha.31379s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold31379: 8446-10445 Arabidopsis halleri
Araha.31379s0002 2.0kb downstream 2.0kb downstream 6148 true Scaffold31379: 2298-8445 Arabidopsis halleri
Araha.31379s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold31379: 2298-4297 Arabidopsis halleri
Araha.31379s0002 5.0kb upstream 5.0kb upstream 9148 true Scaffold31379: 4298-13445 Arabidopsis halleri
Araha.31379s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold31379: 8446-13445 Arabidopsis halleri
Araha.31379s0002 5.0kb downstream 5.0kb downstream 8445 true Scaffold31379: 1-8445 Arabidopsis halleri
Araha.31379s0002 5.0kb downstream 5.0kb downstream 4297 false Scaffold31379: 1-4297 Arabidopsis halleri
Araha.31379s0002 10.0kb upstream 10.0kb upstream 14148 true Scaffold31379: 4298-18445 Arabidopsis halleri
Araha.31379s0002 10.0kb upstream 10.0kb upstream 10000 false Scaffold31379: 8446-18445 Arabidopsis halleri
Araha.31379s0002 10.0kb downstream 10.0kb downstream 8445 true Scaffold31379: 1-8445 Arabidopsis halleri
Araha.31379s0002 10.0kb downstream 10.0kb downstream 4297 false Scaffold31379: 1-4297 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377331 5261 Brassicaceae View MSA
123838611 5264 Brassicales-Malvales View MSA
124343365 5266 SBM View MSA
124239767 5268 Malvidae View MSA
124067534 5270 Rosid View MSA
123744941 5271 Pentapetalae View MSA
122793820 5272 Eudicot View MSA
122044869 5273 Angiosperm View MSA
121344749 5274 Embryophyte View MSA
123424102 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain