Gene : Araha.9818s0004 A. halleri v1.1
Defline:  (1 of 4) PTHR10315:SF34 - E3 UBIQUITIN-PROTEIN LIGASE SINAT3-RELATED Genomic Order:  4
Name:  ? Araha.9818s0004 Secondary Identifier:  ? PAC:28857255
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-7511 Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.9818s0004 0.5kb upstream 0.5kb upstream 2465 true Scaffold9818: 26755-29219 Arabidopsis halleri
Araha.9818s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold9818: 28720-29219 Arabidopsis halleri
Araha.9818s0004 0.5kb downstream 0.5kb downstream 2465 true Scaffold9818: 26255-28719 Arabidopsis halleri
Araha.9818s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold9818: 26255-26754 Arabidopsis halleri
Araha.9818s0004 1.0kb upstream 1.0kb upstream 2965 true Scaffold9818: 26755-29719 Arabidopsis halleri
Araha.9818s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold9818: 28720-29719 Arabidopsis halleri
Araha.9818s0004 1.0kb downstream 1.0kb downstream 2965 true Scaffold9818: 25755-28719 Arabidopsis halleri
Araha.9818s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold9818: 25755-26754 Arabidopsis halleri
Araha.9818s0004 2.0kb upstream 2.0kb upstream 3965 true Scaffold9818: 26755-30719 Arabidopsis halleri
Araha.9818s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold9818: 28720-30719 Arabidopsis halleri
Araha.9818s0004 2.0kb downstream 2.0kb downstream 3965 true Scaffold9818: 24755-28719 Arabidopsis halleri
Araha.9818s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold9818: 24755-26754 Arabidopsis halleri
Araha.9818s0004 5.0kb upstream 5.0kb upstream 6965 true Scaffold9818: 26755-33719 Arabidopsis halleri
Araha.9818s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold9818: 28720-33719 Arabidopsis halleri
Araha.9818s0004 5.0kb downstream 5.0kb downstream 6965 true Scaffold9818: 21755-28719 Arabidopsis halleri
Araha.9818s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold9818: 21755-26754 Arabidopsis halleri
Araha.9818s0004 10.0kb upstream 10.0kb upstream 11965 true Scaffold9818: 26755-38719 Arabidopsis halleri
Araha.9818s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold9818: 28720-38719 Arabidopsis halleri
Araha.9818s0004 10.0kb downstream 10.0kb downstream 11965 true Scaffold9818: 16755-28719 Arabidopsis halleri
Araha.9818s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold9818: 16755-26754 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370268 5261 Brassicaceae View MSA
123840552 5264 Brassicales-Malvales View MSA
124344674 5266 SBM View MSA
124246222 5268 Malvidae View MSA
124072834 5270 Rosid View MSA
123746623 5271 Pentapetalae View MSA
122796827 5272 Eudicot View MSA
122050638 5273 Angiosperm View MSA
121350928 5274 Embryophyte View MSA
123381939 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain