Gene : Araha.32546s0005 A. halleri v1.1

Defline:  (1 of 2) PTHR33601:SF7 - PROTEIN LITTLE ZIPPER 3 Genomic Order:  5
Name:  ? Araha.32546s0005 Secondary Identifier:  ? PAC:28852770

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.32546s0005 0.5kb upstream 0.5kb upstream 2074 true Scaffold32546: 15679-17752 Arabidopsis halleri
Araha.32546s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold32546: 17253-17752 Arabidopsis halleri
Araha.32546s0005 0.5kb downstream 0.5kb downstream 2074 true Scaffold32546: 15179-17252 Arabidopsis halleri
Araha.32546s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold32546: 15179-15678 Arabidopsis halleri
Araha.32546s0005 1.0kb upstream 1.0kb upstream 2574 true Scaffold32546: 15679-18252 Arabidopsis halleri
Araha.32546s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold32546: 17253-18252 Arabidopsis halleri
Araha.32546s0005 1.0kb downstream 1.0kb downstream 2574 true Scaffold32546: 14679-17252 Arabidopsis halleri
Araha.32546s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold32546: 14679-15678 Arabidopsis halleri
Araha.32546s0005 2.0kb upstream 2.0kb upstream 3574 true Scaffold32546: 15679-19252 Arabidopsis halleri
Araha.32546s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold32546: 17253-19252 Arabidopsis halleri
Araha.32546s0005 2.0kb downstream 2.0kb downstream 3574 true Scaffold32546: 13679-17252 Arabidopsis halleri
Araha.32546s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold32546: 13679-15678 Arabidopsis halleri
Araha.32546s0005 5.0kb upstream 5.0kb upstream 6574 true Scaffold32546: 15679-22252 Arabidopsis halleri
Araha.32546s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold32546: 17253-22252 Arabidopsis halleri
Araha.32546s0005 5.0kb downstream 5.0kb downstream 6574 true Scaffold32546: 10679-17252 Arabidopsis halleri
Araha.32546s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold32546: 10679-15678 Arabidopsis halleri
Araha.32546s0005 10.0kb upstream 10.0kb upstream 10458 true Scaffold32546: 15679-26136 Arabidopsis halleri
Araha.32546s0005 10.0kb upstream 10.0kb upstream 8884 false Scaffold32546: 17253-26136 Arabidopsis halleri
Araha.32546s0005 10.0kb downstream 10.0kb downstream 11574 true Scaffold32546: 5679-17252 Arabidopsis halleri
Araha.32546s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold32546: 5679-15678 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376287 5261 Brassicaceae View MSA
123837499 5264 Brassicales-Malvales View MSA
124350083 5266 SBM View MSA
124246935 5268 Malvidae View MSA
124071909 5270 Rosid View MSA
123751498 5271 Pentapetalae View MSA
122790850 5272 Eudicot View MSA
122046003 5273 Angiosperm View MSA
121310535 5274 Embryophyte View MSA
123347994 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain