Gene : Araha.32519s0003 A. halleri v1.1
Defline:  (1 of 2) PTHR31375:SF29 - PECTIN LYASE-LIKE PROTEIN-RELATED Genomic Order:  3
Name:  ? Araha.32519s0003 Secondary Identifier:  ? PAC:28862097
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-1081 Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.32519s0003 0.5kb upstream 0.5kb upstream 2899 true Scaffold32519: 5001-7899 Arabidopsis halleri
Araha.32519s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold32519: 7400-7899 Arabidopsis halleri
Araha.32519s0003 0.5kb downstream 0.5kb downstream 2899 true Scaffold32519: 4501-7399 Arabidopsis halleri
Araha.32519s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold32519: 4501-5000 Arabidopsis halleri
Araha.32519s0003 1.0kb upstream 1.0kb upstream 3399 true Scaffold32519: 5001-8399 Arabidopsis halleri
Araha.32519s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold32519: 7400-8399 Arabidopsis halleri
Araha.32519s0003 1.0kb downstream 1.0kb downstream 3399 true Scaffold32519: 4001-7399 Arabidopsis halleri
Araha.32519s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold32519: 4001-5000 Arabidopsis halleri
Araha.32519s0003 2.0kb upstream 2.0kb upstream 4399 true Scaffold32519: 5001-9399 Arabidopsis halleri
Araha.32519s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold32519: 7400-9399 Arabidopsis halleri
Araha.32519s0003 2.0kb downstream 2.0kb downstream 4399 true Scaffold32519: 3001-7399 Arabidopsis halleri
Araha.32519s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold32519: 3001-5000 Arabidopsis halleri
Araha.32519s0003 5.0kb upstream 5.0kb upstream 7399 true Scaffold32519: 5001-12399 Arabidopsis halleri
Araha.32519s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold32519: 7400-12399 Arabidopsis halleri
Araha.32519s0003 5.0kb downstream 5.0kb downstream 7399 true Scaffold32519: 1-7399 Arabidopsis halleri
Araha.32519s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold32519: 1-5000 Arabidopsis halleri
Araha.32519s0003 10.0kb upstream 10.0kb upstream 11318 true Scaffold32519: 5001-16318 Arabidopsis halleri
Araha.32519s0003 10.0kb upstream 10.0kb upstream 8919 false Scaffold32519: 7400-16318 Arabidopsis halleri
Araha.32519s0003 10.0kb downstream 10.0kb downstream 7399 true Scaffold32519: 1-7399 Arabidopsis halleri
Araha.32519s0003 10.0kb downstream 10.0kb downstream 5000 false Scaffold32519: 1-5000 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370843 5261 Brassicaceae View MSA
123841126 5264 Brassicales-Malvales View MSA
124345334 5266 SBM View MSA
124254286 5268 Malvidae View MSA
124062237 5270 Rosid View MSA
123747899 5271 Pentapetalae View MSA
122789338 5272 Eudicot View MSA
122047278 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain