Gene : Araha.34230s0008 A. halleri v1.1
Defline:  (1 of 2) PTHR12121:SF42 - CARBON CATABOLITE REPRESSOR PROTEIN 4 HOMOLOG 4-RELATED Genomic Order:  8
Name:  ? Araha.34230s0008 Secondary Identifier:  ? PAC:28853826
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.34230s0008 0.5kb upstream 0.5kb upstream 3447 true Scaffold34230: 25287-28733 Arabidopsis halleri
Araha.34230s0008 0.5kb upstream 0.5kb upstream 500 false Scaffold34230: 28234-28733 Arabidopsis halleri
Araha.34230s0008 0.5kb downstream 0.5kb downstream 3447 true Scaffold34230: 24787-28233 Arabidopsis halleri
Araha.34230s0008 0.5kb downstream 0.5kb downstream 500 false Scaffold34230: 24787-25286 Arabidopsis halleri
Araha.34230s0008 1.0kb upstream 1.0kb upstream 3947 true Scaffold34230: 25287-29233 Arabidopsis halleri
Araha.34230s0008 1.0kb upstream 1.0kb upstream 1000 false Scaffold34230: 28234-29233 Arabidopsis halleri
Araha.34230s0008 1.0kb downstream 1.0kb downstream 3947 true Scaffold34230: 24287-28233 Arabidopsis halleri
Araha.34230s0008 1.0kb downstream 1.0kb downstream 1000 false Scaffold34230: 24287-25286 Arabidopsis halleri
Araha.34230s0008 2.0kb upstream 2.0kb upstream 4487 true Scaffold34230: 25287-29773 Arabidopsis halleri
Araha.34230s0008 2.0kb upstream 2.0kb upstream 1540 false Scaffold34230: 28234-29773 Arabidopsis halleri
Araha.34230s0008 2.0kb downstream 2.0kb downstream 4947 true Scaffold34230: 23287-28233 Arabidopsis halleri
Araha.34230s0008 2.0kb downstream 2.0kb downstream 2000 false Scaffold34230: 23287-25286 Arabidopsis halleri
Araha.34230s0008 5.0kb upstream 5.0kb upstream 4487 true Scaffold34230: 25287-29773 Arabidopsis halleri
Araha.34230s0008 5.0kb upstream 5.0kb upstream 1540 false Scaffold34230: 28234-29773 Arabidopsis halleri
Araha.34230s0008 5.0kb downstream 5.0kb downstream 7947 true Scaffold34230: 20287-28233 Arabidopsis halleri
Araha.34230s0008 5.0kb downstream 5.0kb downstream 5000 false Scaffold34230: 20287-25286 Arabidopsis halleri
Araha.34230s0008 10.0kb upstream 10.0kb upstream 4487 true Scaffold34230: 25287-29773 Arabidopsis halleri
Araha.34230s0008 10.0kb upstream 10.0kb upstream 1540 false Scaffold34230: 28234-29773 Arabidopsis halleri
Araha.34230s0008 10.0kb downstream 10.0kb downstream 12947 true Scaffold34230: 15287-28233 Arabidopsis halleri
Araha.34230s0008 10.0kb downstream 10.0kb downstream 10000 false Scaffold34230: 15287-25286 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374949 5261 Brassicaceae View MSA
123839808 5264 Brassicales-Malvales View MSA
124341518 5266 SBM View MSA
124240125 5268 Malvidae View MSA
124063704 5270 Rosid View MSA
123740747 5271 Pentapetalae View MSA
122787902 5272 Eudicot View MSA
122047277 5273 Angiosperm View MSA
121350616 5274 Embryophyte View MSA
123428031 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain