Gene : Araha.34486s0001 A. halleri v1.1
Defline:  (1 of 1) PTHR23315:SF114 - U-BOX DOMAIN-CONTAINING PROTEIN 15 Genomic Order:  1
Name:  ? Araha.34486s0001 Secondary Identifier:  ? PAC:28846725
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-7511 Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.34486s0001 0.5kb upstream 0.5kb upstream 1437 true Scaffold34486: 1-1437 Arabidopsis halleri
Araha.34486s0001 0.5kb upstream 0.5kb upstream 1 false Scaffold34486: 1-1 Arabidopsis halleri
Araha.34486s0001 0.5kb downstream 0.5kb downstream 1936 true Scaffold34486: 2-1937 Arabidopsis halleri
Araha.34486s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold34486: 1438-1937 Arabidopsis halleri
Araha.34486s0001 1.0kb upstream 1.0kb upstream 1437 true Scaffold34486: 1-1437 Arabidopsis halleri
Araha.34486s0001 1.0kb upstream 1.0kb upstream 1 false Scaffold34486: 1-1 Arabidopsis halleri
Araha.34486s0001 1.0kb downstream 1.0kb downstream 2436 true Scaffold34486: 2-2437 Arabidopsis halleri
Araha.34486s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold34486: 1438-2437 Arabidopsis halleri
Araha.34486s0001 2.0kb upstream 2.0kb upstream 1437 true Scaffold34486: 1-1437 Arabidopsis halleri
Araha.34486s0001 2.0kb upstream 2.0kb upstream 1 false Scaffold34486: 1-1 Arabidopsis halleri
Araha.34486s0001 2.0kb downstream 2.0kb downstream 3393 true Scaffold34486: 2-3394 Arabidopsis halleri
Araha.34486s0001 2.0kb downstream 2.0kb downstream 1957 false Scaffold34486: 1438-3394 Arabidopsis halleri
Araha.34486s0001 5.0kb upstream 5.0kb upstream 1437 true Scaffold34486: 1-1437 Arabidopsis halleri
Araha.34486s0001 5.0kb upstream 5.0kb upstream 1 false Scaffold34486: 1-1 Arabidopsis halleri
Araha.34486s0001 5.0kb downstream 5.0kb downstream 3393 true Scaffold34486: 2-3394 Arabidopsis halleri
Araha.34486s0001 5.0kb downstream 5.0kb downstream 1957 false Scaffold34486: 1438-3394 Arabidopsis halleri
Araha.34486s0001 10.0kb upstream 10.0kb upstream 1437 true Scaffold34486: 1-1437 Arabidopsis halleri
Araha.34486s0001 10.0kb upstream 10.0kb upstream 1 false Scaffold34486: 1-1 Arabidopsis halleri
Araha.34486s0001 10.0kb downstream 10.0kb downstream 3393 true Scaffold34486: 2-3394 Arabidopsis halleri
Araha.34486s0001 10.0kb downstream 10.0kb downstream 1957 false Scaffold34486: 1438-3394 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367766 5261 Brassicaceae View MSA
123830469 5264 Brassicales-Malvales View MSA
124339779 5266 SBM View MSA
124237455 5268 Malvidae View MSA
124067004 5270 Rosid View MSA
123739822 5271 Pentapetalae View MSA
122791659 5272 Eudicot View MSA
122041968 5273 Angiosperm View MSA
121350406 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain