Gene : Araha.9988s0002 A. halleri v1.1

Defline:  (1 of 2) PTHR33044:SF5 - PROTEASE INHIBITOR/SEED STORAGE/LIPID TRANSFER PROTEIN FAMILY PROTEIN Genomic Order:  2
Name:  ? Araha.9988s0002 Secondary Identifier:  ? PAC:28836657

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.9988s0002 0.5kb upstream 0.5kb upstream 1259 true Scaffold9988: 758-2016 Arabidopsis halleri
Araha.9988s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold9988: 1517-2016 Arabidopsis halleri
Araha.9988s0002 0.5kb downstream 0.5kb downstream 1259 true Scaffold9988: 258-1516 Arabidopsis halleri
Araha.9988s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold9988: 258-757 Arabidopsis halleri
Araha.9988s0002 1.0kb upstream 1.0kb upstream 1759 true Scaffold9988: 758-2516 Arabidopsis halleri
Araha.9988s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold9988: 1517-2516 Arabidopsis halleri
Araha.9988s0002 1.0kb downstream 1.0kb downstream 1516 true Scaffold9988: 1-1516 Arabidopsis halleri
Araha.9988s0002 1.0kb downstream 1.0kb downstream 757 false Scaffold9988: 1-757 Arabidopsis halleri
Araha.9988s0002 2.0kb upstream 2.0kb upstream 2759 true Scaffold9988: 758-3516 Arabidopsis halleri
Araha.9988s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold9988: 1517-3516 Arabidopsis halleri
Araha.9988s0002 2.0kb downstream 2.0kb downstream 1516 true Scaffold9988: 1-1516 Arabidopsis halleri
Araha.9988s0002 2.0kb downstream 2.0kb downstream 757 false Scaffold9988: 1-757 Arabidopsis halleri
Araha.9988s0002 5.0kb upstream 5.0kb upstream 5759 true Scaffold9988: 758-6516 Arabidopsis halleri
Araha.9988s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold9988: 1517-6516 Arabidopsis halleri
Araha.9988s0002 5.0kb downstream 5.0kb downstream 1516 true Scaffold9988: 1-1516 Arabidopsis halleri
Araha.9988s0002 5.0kb downstream 5.0kb downstream 757 false Scaffold9988: 1-757 Arabidopsis halleri
Araha.9988s0002 10.0kb upstream 10.0kb upstream 10620 true Scaffold9988: 758-11377 Arabidopsis halleri
Araha.9988s0002 10.0kb upstream 10.0kb upstream 9861 false Scaffold9988: 1517-11377 Arabidopsis halleri
Araha.9988s0002 10.0kb downstream 10.0kb downstream 1516 true Scaffold9988: 1-1516 Arabidopsis halleri
Araha.9988s0002 10.0kb downstream 10.0kb downstream 757 false Scaffold9988: 1-757 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365318 5261 Brassicaceae View MSA
123836948 5264 Brassicales-Malvales View MSA
124340141 5266 SBM View MSA
124239228 5268 Malvidae View MSA
124063139 5270 Rosid View MSA
123741204 5271 Pentapetalae View MSA
122796719 5272 Eudicot View MSA
122046697 5273 Angiosperm View MSA
121350962 5274 Embryophyte View MSA
123381949 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain