Gene : Araha.9920s0003 A. halleri v1.1
Defline:  (1 of 2) PTHR10947 - PHENYLALANYL-TRNA SYNTHETASE BETA CHAIN AND LEUCINE-RICH REPEAT-CONTAINING PROTEIN 47 Genomic Order:  3
Name:  ? Araha.9920s0003 Secondary Identifier:  ? PAC:28858865
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri TRNA-CHARGING-PWY Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.9920s0003 0.5kb upstream 0.5kb upstream 4681 true Scaffold9920: 6458-11138 Arabidopsis halleri
Araha.9920s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold9920: 10639-11138 Arabidopsis halleri
Araha.9920s0003 0.5kb downstream 0.5kb downstream 4681 true Scaffold9920: 5958-10638 Arabidopsis halleri
Araha.9920s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold9920: 5958-6457 Arabidopsis halleri
Araha.9920s0003 1.0kb upstream 1.0kb upstream 5181 true Scaffold9920: 6458-11638 Arabidopsis halleri
Araha.9920s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold9920: 10639-11638 Arabidopsis halleri
Araha.9920s0003 1.0kb downstream 1.0kb downstream 5181 true Scaffold9920: 5458-10638 Arabidopsis halleri
Araha.9920s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold9920: 5458-6457 Arabidopsis halleri
Araha.9920s0003 2.0kb upstream 2.0kb upstream 6181 true Scaffold9920: 6458-12638 Arabidopsis halleri
Araha.9920s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold9920: 10639-12638 Arabidopsis halleri
Araha.9920s0003 2.0kb downstream 2.0kb downstream 6181 true Scaffold9920: 4458-10638 Arabidopsis halleri
Araha.9920s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold9920: 4458-6457 Arabidopsis halleri
Araha.9920s0003 5.0kb upstream 5.0kb upstream 9181 true Scaffold9920: 6458-15638 Arabidopsis halleri
Araha.9920s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold9920: 10639-15638 Arabidopsis halleri
Araha.9920s0003 5.0kb downstream 5.0kb downstream 9181 true Scaffold9920: 1458-10638 Arabidopsis halleri
Araha.9920s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold9920: 1458-6457 Arabidopsis halleri
Araha.9920s0003 10.0kb upstream 10.0kb upstream 14181 true Scaffold9920: 6458-20638 Arabidopsis halleri
Araha.9920s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold9920: 10639-20638 Arabidopsis halleri
Araha.9920s0003 10.0kb downstream 10.0kb downstream 10638 true Scaffold9920: 1-10638 Arabidopsis halleri
Araha.9920s0003 10.0kb downstream 10.0kb downstream 6457 false Scaffold9920: 1-6457 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361573 5261 Brassicaceae View MSA
123834957 5264 Brassicales-Malvales View MSA
124339817 5266 SBM View MSA
124238696 5268 Malvidae View MSA
124062601 5270 Rosid View MSA
123738962 5271 Pentapetalae View MSA
122792851 5272 Eudicot View MSA
122042437 5273 Angiosperm View MSA
121345306 5274 Embryophyte View MSA
123425015 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain