Gene : Araha.35607s0010 A. halleri v1.1
Defline:  (1 of 3) 1.1.1.42 - Isocitrate dehydrogenase (NADP(+)) / oxalosuccinate carboxylase Genomic Order:  10
Name:  ? Araha.35607s0010 Secondary Identifier:  ? PAC:28850769
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-6549 Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.35607s0010 0.5kb upstream 0.5kb upstream 4224 true Scaffold35607: 32720-36943 Arabidopsis halleri
Araha.35607s0010 0.5kb upstream 0.5kb upstream 500 false Scaffold35607: 32720-33219 Arabidopsis halleri
Araha.35607s0010 0.5kb downstream 0.5kb downstream 4224 true Scaffold35607: 33220-37443 Arabidopsis halleri
Araha.35607s0010 0.5kb downstream 0.5kb downstream 500 false Scaffold35607: 36944-37443 Arabidopsis halleri
Araha.35607s0010 1.0kb upstream 1.0kb upstream 4724 true Scaffold35607: 32220-36943 Arabidopsis halleri
Araha.35607s0010 1.0kb upstream 1.0kb upstream 1000 false Scaffold35607: 32220-33219 Arabidopsis halleri
Araha.35607s0010 1.0kb downstream 1.0kb downstream 4724 true Scaffold35607: 33220-37943 Arabidopsis halleri
Araha.35607s0010 1.0kb downstream 1.0kb downstream 1000 false Scaffold35607: 36944-37943 Arabidopsis halleri
Araha.35607s0010 2.0kb upstream 2.0kb upstream 5724 true Scaffold35607: 31220-36943 Arabidopsis halleri
Araha.35607s0010 2.0kb upstream 2.0kb upstream 2000 false Scaffold35607: 31220-33219 Arabidopsis halleri
Araha.35607s0010 2.0kb downstream 2.0kb downstream 5724 true Scaffold35607: 33220-38943 Arabidopsis halleri
Araha.35607s0010 2.0kb downstream 2.0kb downstream 2000 false Scaffold35607: 36944-38943 Arabidopsis halleri
Araha.35607s0010 5.0kb upstream 5.0kb upstream 8724 true Scaffold35607: 28220-36943 Arabidopsis halleri
Araha.35607s0010 5.0kb upstream 5.0kb upstream 5000 false Scaffold35607: 28220-33219 Arabidopsis halleri
Araha.35607s0010 5.0kb downstream 5.0kb downstream 8724 true Scaffold35607: 33220-41943 Arabidopsis halleri
Araha.35607s0010 5.0kb downstream 5.0kb downstream 5000 false Scaffold35607: 36944-41943 Arabidopsis halleri
Araha.35607s0010 10.0kb upstream 10.0kb upstream 13724 true Scaffold35607: 23220-36943 Arabidopsis halleri
Araha.35607s0010 10.0kb upstream 10.0kb upstream 10000 false Scaffold35607: 23220-33219 Arabidopsis halleri
Araha.35607s0010 10.0kb downstream 10.0kb downstream 13724 true Scaffold35607: 33220-46943 Arabidopsis halleri
Araha.35607s0010 10.0kb downstream 10.0kb downstream 10000 false Scaffold35607: 36944-46943 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361976 5261 Brassicaceae View MSA
123836810 5264 Brassicales-Malvales View MSA
124343936 5266 SBM View MSA
124253615 5268 Malvidae View MSA
124070230 5270 Rosid View MSA
123744673 5271 Pentapetalae View MSA
122792686 5272 Eudicot View MSA
122045414 5273 Angiosperm View MSA
121351363 5274 Embryophyte View MSA
123426624 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain