Gene : Araha.36143s0003 A. halleri v1.1

Defline:  (1 of 1) PTHR10073:SF40 - DNA MISMATCH REPAIR PROTEIN MLH1 Genomic Order:  3
Name:  ? Araha.36143s0003 Secondary Identifier:  ? PAC:28857407

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.36143s0003 0.5kb upstream 0.5kb upstream 4646 true Scaffold36143: 3898-8543 Arabidopsis halleri
Araha.36143s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold36143: 8044-8543 Arabidopsis halleri
Araha.36143s0003 0.5kb downstream 0.5kb downstream 4646 true Scaffold36143: 3398-8043 Arabidopsis halleri
Araha.36143s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold36143: 3398-3897 Arabidopsis halleri
Araha.36143s0003 1.0kb upstream 1.0kb upstream 5146 true Scaffold36143: 3898-9043 Arabidopsis halleri
Araha.36143s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold36143: 8044-9043 Arabidopsis halleri
Araha.36143s0003 1.0kb downstream 1.0kb downstream 5146 true Scaffold36143: 2898-8043 Arabidopsis halleri
Araha.36143s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold36143: 2898-3897 Arabidopsis halleri
Araha.36143s0003 2.0kb upstream 2.0kb upstream 6146 true Scaffold36143: 3898-10043 Arabidopsis halleri
Araha.36143s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold36143: 8044-10043 Arabidopsis halleri
Araha.36143s0003 2.0kb downstream 2.0kb downstream 6146 true Scaffold36143: 1898-8043 Arabidopsis halleri
Araha.36143s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold36143: 1898-3897 Arabidopsis halleri
Araha.36143s0003 5.0kb upstream 5.0kb upstream 9146 true Scaffold36143: 3898-13043 Arabidopsis halleri
Araha.36143s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold36143: 8044-13043 Arabidopsis halleri
Araha.36143s0003 5.0kb downstream 5.0kb downstream 8043 true Scaffold36143: 1-8043 Arabidopsis halleri
Araha.36143s0003 5.0kb downstream 5.0kb downstream 3897 false Scaffold36143: 1-3897 Arabidopsis halleri
Araha.36143s0003 10.0kb upstream 10.0kb upstream 14146 true Scaffold36143: 3898-18043 Arabidopsis halleri
Araha.36143s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold36143: 8044-18043 Arabidopsis halleri
Araha.36143s0003 10.0kb downstream 10.0kb downstream 8043 true Scaffold36143: 1-8043 Arabidopsis halleri
Araha.36143s0003 10.0kb downstream 10.0kb downstream 3897 false Scaffold36143: 1-3897 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374886 5261 Brassicaceae View MSA
123832351 5264 Brassicales-Malvales View MSA
124340120 5266 SBM View MSA
124240486 5268 Malvidae View MSA
124050491 5270 Rosid View MSA
123746957 5271 Pentapetalae View MSA
122790973 5272 Eudicot View MSA
122045945 5273 Angiosperm View MSA
121345216 5274 Embryophyte View MSA
123426273 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain