Gene : Araha.35998s0001 A. halleri v1.1
Defline:  (1 of 1) PTHR13994:SF9 - NUDIX HYDROLASE 8 Genomic Order:  1
Name:  ? Araha.35998s0001 Secondary Identifier:  ? PAC:28852110
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-5381 Arabidopsis halleri pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.35998s0001 0.5kb upstream 0.5kb upstream 1463 true Scaffold35998: 1-1463 Arabidopsis halleri
Araha.35998s0001 0.5kb upstream 0.5kb upstream 2 false Scaffold35998: 1-2 Arabidopsis halleri
Araha.35998s0001 0.5kb downstream 0.5kb downstream 1961 true Scaffold35998: 3-1963 Arabidopsis halleri
Araha.35998s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold35998: 1464-1963 Arabidopsis halleri
Araha.35998s0001 1.0kb upstream 1.0kb upstream 1463 true Scaffold35998: 1-1463 Arabidopsis halleri
Araha.35998s0001 1.0kb upstream 1.0kb upstream 2 false Scaffold35998: 1-2 Arabidopsis halleri
Araha.35998s0001 1.0kb downstream 1.0kb downstream 2461 true Scaffold35998: 3-2463 Arabidopsis halleri
Araha.35998s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold35998: 1464-2463 Arabidopsis halleri
Araha.35998s0001 2.0kb upstream 2.0kb upstream 1463 true Scaffold35998: 1-1463 Arabidopsis halleri
Araha.35998s0001 2.0kb upstream 2.0kb upstream 2 false Scaffold35998: 1-2 Arabidopsis halleri
Araha.35998s0001 2.0kb downstream 2.0kb downstream 3461 true Scaffold35998: 3-3463 Arabidopsis halleri
Araha.35998s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold35998: 1464-3463 Arabidopsis halleri
Araha.35998s0001 5.0kb upstream 5.0kb upstream 1463 true Scaffold35998: 1-1463 Arabidopsis halleri
Araha.35998s0001 5.0kb upstream 5.0kb upstream 2 false Scaffold35998: 1-2 Arabidopsis halleri
Araha.35998s0001 5.0kb downstream 5.0kb downstream 6461 true Scaffold35998: 3-6463 Arabidopsis halleri
Araha.35998s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold35998: 1464-6463 Arabidopsis halleri
Araha.35998s0001 10.0kb upstream 10.0kb upstream 1463 true Scaffold35998: 1-1463 Arabidopsis halleri
Araha.35998s0001 10.0kb upstream 10.0kb upstream 2 false Scaffold35998: 1-2 Arabidopsis halleri
Araha.35998s0001 10.0kb downstream 10.0kb downstream 7694 true Scaffold35998: 3-7696 Arabidopsis halleri
Araha.35998s0001 10.0kb downstream 10.0kb downstream 6233 false Scaffold35998: 1464-7696 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369206 5261 Brassicaceae View MSA
123828958 5264 Brassicales-Malvales View MSA
124337528 5266 SBM View MSA
124238043 5268 Malvidae View MSA
124050440 5270 Rosid View MSA
123741366 5271 Pentapetalae View MSA
122785927 5272 Eudicot View MSA
122049902 5273 Angiosperm View MSA
121347954 5274 Embryophyte View MSA
123428722 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain