Gene : Araha.35031s0001 A. halleri v1.1

Defline:  (1 of 1) PTHR33162:SF1 - SEC-INDEPENDENT PROTEIN TRANSLOCASE PROTEIN TATA, CHLOROPLASTIC Genomic Order:  1
Name:  ? Araha.35031s0001 Secondary Identifier:  ? PAC:28840185

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.35031s0001 0.5kb upstream 0.5kb upstream 1924 true Scaffold35031: 4620-6543 Arabidopsis halleri
Araha.35031s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold35031: 4620-5119 Arabidopsis halleri
Araha.35031s0001 0.5kb downstream 0.5kb downstream 1924 true Scaffold35031: 5120-7043 Arabidopsis halleri
Araha.35031s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold35031: 6544-7043 Arabidopsis halleri
Araha.35031s0001 1.0kb upstream 1.0kb upstream 2424 true Scaffold35031: 4120-6543 Arabidopsis halleri
Araha.35031s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold35031: 4120-5119 Arabidopsis halleri
Araha.35031s0001 1.0kb downstream 1.0kb downstream 2424 true Scaffold35031: 5120-7543 Arabidopsis halleri
Araha.35031s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold35031: 6544-7543 Arabidopsis halleri
Araha.35031s0001 2.0kb upstream 2.0kb upstream 3424 true Scaffold35031: 3120-6543 Arabidopsis halleri
Araha.35031s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold35031: 3120-5119 Arabidopsis halleri
Araha.35031s0001 2.0kb downstream 2.0kb downstream 3424 true Scaffold35031: 5120-8543 Arabidopsis halleri
Araha.35031s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold35031: 6544-8543 Arabidopsis halleri
Araha.35031s0001 5.0kb upstream 5.0kb upstream 6424 true Scaffold35031: 120-6543 Arabidopsis halleri
Araha.35031s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold35031: 120-5119 Arabidopsis halleri
Araha.35031s0001 5.0kb downstream 5.0kb downstream 6424 true Scaffold35031: 5120-11543 Arabidopsis halleri
Araha.35031s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold35031: 6544-11543 Arabidopsis halleri
Araha.35031s0001 10.0kb upstream 10.0kb upstream 6543 true Scaffold35031: 1-6543 Arabidopsis halleri
Araha.35031s0001 10.0kb upstream 10.0kb upstream 5119 false Scaffold35031: 1-5119 Arabidopsis halleri
Araha.35031s0001 10.0kb downstream 10.0kb downstream 11424 true Scaffold35031: 5120-16543 Arabidopsis halleri
Araha.35031s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold35031: 6544-16543 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361408 5261 Brassicaceae View MSA
123827343 5264 Brassicales-Malvales View MSA
124343258 5266 SBM View MSA
124241314 5268 Malvidae View MSA
124067421 5270 Rosid View MSA
123742518 5271 Pentapetalae View MSA
122797436 5272 Eudicot View MSA
122042839 5273 Angiosperm View MSA
123429010 5275 Viridiplantae View MSA
121350142 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain