Gene : Araha.34834s0001 A. halleri v1.1

Defline:  (1 of 12) PTHR31589:SF17 - GENOMIC DNA, CHROMOSOME 5, P1 CLONE:MZA15-RELATED Genomic Order:  1
Name:  ? Araha.34834s0001 Secondary Identifier:  ? PAC:28859002

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.34834s0001 0.5kb upstream 0.5kb upstream 2309 true Scaffold34834: 2424-4732 Arabidopsis halleri
Araha.34834s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold34834: 2424-2923 Arabidopsis halleri
Araha.34834s0001 0.5kb downstream 0.5kb downstream 2309 true Scaffold34834: 2924-5232 Arabidopsis halleri
Araha.34834s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold34834: 4733-5232 Arabidopsis halleri
Araha.34834s0001 1.0kb upstream 1.0kb upstream 2809 true Scaffold34834: 1924-4732 Arabidopsis halleri
Araha.34834s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold34834: 1924-2923 Arabidopsis halleri
Araha.34834s0001 1.0kb downstream 1.0kb downstream 2809 true Scaffold34834: 2924-5732 Arabidopsis halleri
Araha.34834s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold34834: 4733-5732 Arabidopsis halleri
Araha.34834s0001 2.0kb upstream 2.0kb upstream 3809 true Scaffold34834: 924-4732 Arabidopsis halleri
Araha.34834s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold34834: 924-2923 Arabidopsis halleri
Araha.34834s0001 2.0kb downstream 2.0kb downstream 3809 true Scaffold34834: 2924-6732 Arabidopsis halleri
Araha.34834s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold34834: 4733-6732 Arabidopsis halleri
Araha.34834s0001 5.0kb upstream 5.0kb upstream 4732 true Scaffold34834: 1-4732 Arabidopsis halleri
Araha.34834s0001 5.0kb upstream 5.0kb upstream 2923 false Scaffold34834: 1-2923 Arabidopsis halleri
Araha.34834s0001 5.0kb downstream 5.0kb downstream 6809 true Scaffold34834: 2924-9732 Arabidopsis halleri
Araha.34834s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold34834: 4733-9732 Arabidopsis halleri
Araha.34834s0001 10.0kb upstream 10.0kb upstream 4732 true Scaffold34834: 1-4732 Arabidopsis halleri
Araha.34834s0001 10.0kb upstream 10.0kb upstream 2923 false Scaffold34834: 1-2923 Arabidopsis halleri
Araha.34834s0001 10.0kb downstream 10.0kb downstream 11809 true Scaffold34834: 2924-14732 Arabidopsis halleri
Araha.34834s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold34834: 4733-14732 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380303 5261 Brassicaceae View MSA
123802645 5264 Brassicales-Malvales View MSA
124299826 5266 SBM View MSA
124151141 5268 Malvidae View MSA
123876641 5270 Rosid View MSA
123754853 5271 Pentapetalae View MSA
122796959 5272 Eudicot View MSA
122051639 5273 Angiosperm View MSA
121347802 5274 Embryophyte View MSA
123380632 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain