Gene : Araha.35233s0001 A. halleri v1.1

Defline:  (1 of 5) PTHR23070:SF35 - AAA DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  1
Name:  ? Araha.35233s0001 Secondary Identifier:  ? PAC:28836891

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.35233s0001 0.5kb upstream 0.5kb upstream 2487 true Scaffold35233: 268-2754 Arabidopsis halleri
Araha.35233s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold35233: 2255-2754 Arabidopsis halleri
Araha.35233s0001 0.5kb downstream 0.5kb downstream 2254 true Scaffold35233: 1-2254 Arabidopsis halleri
Araha.35233s0001 0.5kb downstream 0.5kb downstream 267 false Scaffold35233: 1-267 Arabidopsis halleri
Araha.35233s0001 1.0kb upstream 1.0kb upstream 2987 true Scaffold35233: 268-3254 Arabidopsis halleri
Araha.35233s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold35233: 2255-3254 Arabidopsis halleri
Araha.35233s0001 1.0kb downstream 1.0kb downstream 2254 true Scaffold35233: 1-2254 Arabidopsis halleri
Araha.35233s0001 1.0kb downstream 1.0kb downstream 267 false Scaffold35233: 1-267 Arabidopsis halleri
Araha.35233s0001 2.0kb upstream 2.0kb upstream 3987 true Scaffold35233: 268-4254 Arabidopsis halleri
Araha.35233s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold35233: 2255-4254 Arabidopsis halleri
Araha.35233s0001 2.0kb downstream 2.0kb downstream 2254 true Scaffold35233: 1-2254 Arabidopsis halleri
Araha.35233s0001 2.0kb downstream 2.0kb downstream 267 false Scaffold35233: 1-267 Arabidopsis halleri
Araha.35233s0001 5.0kb upstream 5.0kb upstream 6987 true Scaffold35233: 268-7254 Arabidopsis halleri
Araha.35233s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold35233: 2255-7254 Arabidopsis halleri
Araha.35233s0001 5.0kb downstream 5.0kb downstream 2254 true Scaffold35233: 1-2254 Arabidopsis halleri
Araha.35233s0001 5.0kb downstream 5.0kb downstream 267 false Scaffold35233: 1-267 Arabidopsis halleri
Araha.35233s0001 10.0kb upstream 10.0kb upstream 11643 true Scaffold35233: 268-11910 Arabidopsis halleri
Araha.35233s0001 10.0kb upstream 10.0kb upstream 9656 false Scaffold35233: 2255-11910 Arabidopsis halleri
Araha.35233s0001 10.0kb downstream 10.0kb downstream 2254 true Scaffold35233: 1-2254 Arabidopsis halleri
Araha.35233s0001 10.0kb downstream 10.0kb downstream 267 false Scaffold35233: 1-267 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372418 5261 Brassicaceae View MSA
123840376 5264 Brassicales-Malvales View MSA
124345478 5266 SBM View MSA
124246639 5268 Malvidae View MSA
124074026 5270 Rosid View MSA
123751190 5271 Pentapetalae View MSA
122795594 5272 Eudicot View MSA
122041675 5273 Angiosperm View MSA
121352297 5274 Embryophyte View MSA
123428466 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain