Gene : Araha.37389s0003 A. halleri v1.1

Defline:  (1 of 1) PTHR22939:SF79 - PEPTIDASE M50 FAMILY PROTEIN Genomic Order:  3
Name:  ? Araha.37389s0003 Secondary Identifier:  ? PAC:28843894

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.37389s0003 0.5kb upstream 0.5kb upstream 1983 true Scaffold37389: 4764-6746 Arabidopsis halleri
Araha.37389s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold37389: 4764-5263 Arabidopsis halleri
Araha.37389s0003 0.5kb downstream 0.5kb downstream 1983 true Scaffold37389: 5264-7246 Arabidopsis halleri
Araha.37389s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold37389: 6747-7246 Arabidopsis halleri
Araha.37389s0003 1.0kb upstream 1.0kb upstream 2483 true Scaffold37389: 4264-6746 Arabidopsis halleri
Araha.37389s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold37389: 4264-5263 Arabidopsis halleri
Araha.37389s0003 1.0kb downstream 1.0kb downstream 2483 true Scaffold37389: 5264-7746 Arabidopsis halleri
Araha.37389s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold37389: 6747-7746 Arabidopsis halleri
Araha.37389s0003 2.0kb upstream 2.0kb upstream 3483 true Scaffold37389: 3264-6746 Arabidopsis halleri
Araha.37389s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold37389: 3264-5263 Arabidopsis halleri
Araha.37389s0003 2.0kb downstream 2.0kb downstream 3483 true Scaffold37389: 5264-8746 Arabidopsis halleri
Araha.37389s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold37389: 6747-8746 Arabidopsis halleri
Araha.37389s0003 5.0kb upstream 5.0kb upstream 6483 true Scaffold37389: 264-6746 Arabidopsis halleri
Araha.37389s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold37389: 264-5263 Arabidopsis halleri
Araha.37389s0003 5.0kb downstream 5.0kb downstream 6483 true Scaffold37389: 5264-11746 Arabidopsis halleri
Araha.37389s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold37389: 6747-11746 Arabidopsis halleri
Araha.37389s0003 10.0kb upstream 10.0kb upstream 6746 true Scaffold37389: 1-6746 Arabidopsis halleri
Araha.37389s0003 10.0kb upstream 10.0kb upstream 5263 false Scaffold37389: 1-5263 Arabidopsis halleri
Araha.37389s0003 10.0kb downstream 10.0kb downstream 11483 true Scaffold37389: 5264-16746 Arabidopsis halleri
Araha.37389s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold37389: 6747-16746 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361531 5261 Brassicaceae View MSA
123835925 5264 Brassicales-Malvales View MSA
124346146 5266 SBM View MSA
124246459 5268 Malvidae View MSA
124063019 5270 Rosid View MSA
123739273 5271 Pentapetalae View MSA
122788607 5272 Eudicot View MSA
122044779 5273 Angiosperm View MSA
121347975 5274 Embryophyte View MSA
123424345 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain