Gene : Araha.37876s0001 A. halleri v1.1

Defline:  (1 of 1) PTHR31621:SF1 - DUF679 DOMAIN MEMBRANE PROTEIN 1 Genomic Order:  1
Name:  ? Araha.37876s0001 Secondary Identifier:  ? PAC:28840155

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.37876s0001 0.5kb upstream 0.5kb upstream 1124 true Scaffold37876: 3708-4831 Arabidopsis halleri
Araha.37876s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold37876: 3708-4207 Arabidopsis halleri
Araha.37876s0001 0.5kb downstream 0.5kb downstream 1124 true Scaffold37876: 4208-5331 Arabidopsis halleri
Araha.37876s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold37876: 4832-5331 Arabidopsis halleri
Araha.37876s0001 1.0kb upstream 1.0kb upstream 1624 true Scaffold37876: 3208-4831 Arabidopsis halleri
Araha.37876s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold37876: 3208-4207 Arabidopsis halleri
Araha.37876s0001 1.0kb downstream 1.0kb downstream 1624 true Scaffold37876: 4208-5831 Arabidopsis halleri
Araha.37876s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold37876: 4832-5831 Arabidopsis halleri
Araha.37876s0001 2.0kb upstream 2.0kb upstream 2624 true Scaffold37876: 2208-4831 Arabidopsis halleri
Araha.37876s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold37876: 2208-4207 Arabidopsis halleri
Araha.37876s0001 2.0kb downstream 2.0kb downstream 2624 true Scaffold37876: 4208-6831 Arabidopsis halleri
Araha.37876s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold37876: 4832-6831 Arabidopsis halleri
Araha.37876s0001 5.0kb upstream 5.0kb upstream 4831 true Scaffold37876: 1-4831 Arabidopsis halleri
Araha.37876s0001 5.0kb upstream 5.0kb upstream 4207 false Scaffold37876: 1-4207 Arabidopsis halleri
Araha.37876s0001 5.0kb downstream 5.0kb downstream 5624 true Scaffold37876: 4208-9831 Arabidopsis halleri
Araha.37876s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold37876: 4832-9831 Arabidopsis halleri
Araha.37876s0001 10.0kb upstream 10.0kb upstream 4831 true Scaffold37876: 1-4831 Arabidopsis halleri
Araha.37876s0001 10.0kb upstream 10.0kb upstream 4207 false Scaffold37876: 1-4207 Arabidopsis halleri
Araha.37876s0001 10.0kb downstream 10.0kb downstream 10624 true Scaffold37876: 4208-14831 Arabidopsis halleri
Araha.37876s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold37876: 4832-14831 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370824 5261 Brassicaceae View MSA
123838098 5264 Brassicales-Malvales View MSA
124349774 5266 SBM View MSA
124249306 5268 Malvidae View MSA
124066141 5270 Rosid View MSA
123749826 5271 Pentapetalae View MSA
122795559 5272 Eudicot View MSA
122046671 5273 Angiosperm View MSA
121349168 5274 Embryophyte View MSA
123426818 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain