Gene : Araha.37751s0001 A. halleri v1.1

Defline:  (1 of 3) PTHR31458:SF3 - POLYGALACTURONASE NON-CATALYTIC SUBUNIT JP630-RELATED Genomic Order:  1
Name:  ? Araha.37751s0001 Secondary Identifier:  ? PAC:28855258

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.37751s0001 0.5kb upstream 0.5kb upstream 1844 true Scaffold37751: 34-1877 Arabidopsis halleri
Araha.37751s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold37751: 1378-1877 Arabidopsis halleri
Araha.37751s0001 0.5kb downstream 0.5kb downstream 1377 true Scaffold37751: 1-1377 Arabidopsis halleri
Araha.37751s0001 0.5kb downstream 0.5kb downstream 33 false Scaffold37751: 1-33 Arabidopsis halleri
Araha.37751s0001 1.0kb upstream 1.0kb upstream 2344 true Scaffold37751: 34-2377 Arabidopsis halleri
Araha.37751s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold37751: 1378-2377 Arabidopsis halleri
Araha.37751s0001 1.0kb downstream 1.0kb downstream 1377 true Scaffold37751: 1-1377 Arabidopsis halleri
Araha.37751s0001 1.0kb downstream 1.0kb downstream 33 false Scaffold37751: 1-33 Arabidopsis halleri
Araha.37751s0001 2.0kb upstream 2.0kb upstream 3344 true Scaffold37751: 34-3377 Arabidopsis halleri
Araha.37751s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold37751: 1378-3377 Arabidopsis halleri
Araha.37751s0001 2.0kb downstream 2.0kb downstream 1377 true Scaffold37751: 1-1377 Arabidopsis halleri
Araha.37751s0001 2.0kb downstream 2.0kb downstream 33 false Scaffold37751: 1-33 Arabidopsis halleri
Araha.37751s0001 5.0kb upstream 5.0kb upstream 5935 true Scaffold37751: 34-5968 Arabidopsis halleri
Araha.37751s0001 5.0kb upstream 5.0kb upstream 4591 false Scaffold37751: 1378-5968 Arabidopsis halleri
Araha.37751s0001 5.0kb downstream 5.0kb downstream 1377 true Scaffold37751: 1-1377 Arabidopsis halleri
Araha.37751s0001 5.0kb downstream 5.0kb downstream 33 false Scaffold37751: 1-33 Arabidopsis halleri
Araha.37751s0001 10.0kb upstream 10.0kb upstream 5935 true Scaffold37751: 34-5968 Arabidopsis halleri
Araha.37751s0001 10.0kb upstream 10.0kb upstream 4591 false Scaffold37751: 1378-5968 Arabidopsis halleri
Araha.37751s0001 10.0kb downstream 10.0kb downstream 1377 true Scaffold37751: 1-1377 Arabidopsis halleri
Araha.37751s0001 10.0kb downstream 10.0kb downstream 33 false Scaffold37751: 1-33 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372157 5261 Brassicaceae View MSA
123840540 5264 Brassicales-Malvales View MSA
124322738 5266 SBM View MSA
124169209 5268 Malvidae View MSA
124060515 5270 Rosid View MSA
123747690 5271 Pentapetalae View MSA
122795038 5272 Eudicot View MSA
122050223 5273 Angiosperm View MSA
121351029 5274 Embryophyte View MSA
123381981 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain