Gene : Araha.37687s0005 A. halleri v1.1
Defline:  (1 of 1) 2.1.1.11 - Magnesium protoporphyrin IX methyltransferase / S-adenosylmethioninemagnesium protoporphyrin methyltransferase Genomic Order:  5
Name:  ? Araha.37687s0005 Secondary Identifier:  ? PAC:28850570
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri CHLOROPHYLL-SYN Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.37687s0005 0.5kb upstream 0.5kb upstream 1934 true Scaffold37687: 16139-18072 Arabidopsis halleri
Araha.37687s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold37687: 16139-16638 Arabidopsis halleri
Araha.37687s0005 0.5kb downstream 0.5kb downstream 1934 true Scaffold37687: 16639-18572 Arabidopsis halleri
Araha.37687s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold37687: 18073-18572 Arabidopsis halleri
Araha.37687s0005 1.0kb upstream 1.0kb upstream 2434 true Scaffold37687: 15639-18072 Arabidopsis halleri
Araha.37687s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold37687: 15639-16638 Arabidopsis halleri
Araha.37687s0005 1.0kb downstream 1.0kb downstream 2434 true Scaffold37687: 16639-19072 Arabidopsis halleri
Araha.37687s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold37687: 18073-19072 Arabidopsis halleri
Araha.37687s0005 2.0kb upstream 2.0kb upstream 3434 true Scaffold37687: 14639-18072 Arabidopsis halleri
Araha.37687s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold37687: 14639-16638 Arabidopsis halleri
Araha.37687s0005 2.0kb downstream 2.0kb downstream 3434 true Scaffold37687: 16639-20072 Arabidopsis halleri
Araha.37687s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold37687: 18073-20072 Arabidopsis halleri
Araha.37687s0005 5.0kb upstream 5.0kb upstream 6434 true Scaffold37687: 11639-18072 Arabidopsis halleri
Araha.37687s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold37687: 11639-16638 Arabidopsis halleri
Araha.37687s0005 5.0kb downstream 5.0kb downstream 5386 true Scaffold37687: 16639-22024 Arabidopsis halleri
Araha.37687s0005 5.0kb downstream 5.0kb downstream 3952 false Scaffold37687: 18073-22024 Arabidopsis halleri
Araha.37687s0005 10.0kb upstream 10.0kb upstream 11434 true Scaffold37687: 6639-18072 Arabidopsis halleri
Araha.37687s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold37687: 6639-16638 Arabidopsis halleri
Araha.37687s0005 10.0kb downstream 10.0kb downstream 5386 true Scaffold37687: 16639-22024 Arabidopsis halleri
Araha.37687s0005 10.0kb downstream 10.0kb downstream 3952 false Scaffold37687: 18073-22024 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121485620 5273 Angiosperm Singleton cluster - no MSA
122319338 5261 Brassicaceae Singleton cluster - no MSA
123760938 5264 Brassicales-Malvales Singleton cluster - no MSA
124259573 5266 SBM Singleton cluster - no MSA
124116195 5268 Malvidae Singleton cluster - no MSA
123845587 5270 Rosid Singleton cluster - no MSA
123431868 5271 Pentapetalae Singleton cluster - no MSA
122467489 5272 Eudicot Singleton cluster - no MSA
120759014 5274 Embryophyte Singleton cluster - no MSA
122801473 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain