Gene : Araha.38918s0005 A. halleri v1.1

Defline:  (1 of 1) PTHR21738:SF0 - RIBOSOMAL RNA PROCESSING PROTEIN 36 HOMOLOG Genomic Order:  5
Name:  ? Araha.38918s0005 Secondary Identifier:  ? PAC:28838336

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.38918s0005 0.5kb upstream 0.5kb upstream 2067 true Scaffold38918: 6483-8549 Arabidopsis halleri
Araha.38918s0005 0.5kb upstream 0.5kb upstream 84 false Scaffold38918: 8466-8549 Arabidopsis halleri
Araha.38918s0005 0.5kb downstream 0.5kb downstream 2483 true Scaffold38918: 5983-8465 Arabidopsis halleri
Araha.38918s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold38918: 5983-6482 Arabidopsis halleri
Araha.38918s0005 1.0kb upstream 1.0kb upstream 2067 true Scaffold38918: 6483-8549 Arabidopsis halleri
Araha.38918s0005 1.0kb upstream 1.0kb upstream 84 false Scaffold38918: 8466-8549 Arabidopsis halleri
Araha.38918s0005 1.0kb downstream 1.0kb downstream 2983 true Scaffold38918: 5483-8465 Arabidopsis halleri
Araha.38918s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold38918: 5483-6482 Arabidopsis halleri
Araha.38918s0005 2.0kb upstream 2.0kb upstream 2067 true Scaffold38918: 6483-8549 Arabidopsis halleri
Araha.38918s0005 2.0kb upstream 2.0kb upstream 84 false Scaffold38918: 8466-8549 Arabidopsis halleri
Araha.38918s0005 2.0kb downstream 2.0kb downstream 3983 true Scaffold38918: 4483-8465 Arabidopsis halleri
Araha.38918s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold38918: 4483-6482 Arabidopsis halleri
Araha.38918s0005 5.0kb upstream 5.0kb upstream 2067 true Scaffold38918: 6483-8549 Arabidopsis halleri
Araha.38918s0005 5.0kb upstream 5.0kb upstream 84 false Scaffold38918: 8466-8549 Arabidopsis halleri
Araha.38918s0005 5.0kb downstream 5.0kb downstream 6983 true Scaffold38918: 1483-8465 Arabidopsis halleri
Araha.38918s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold38918: 1483-6482 Arabidopsis halleri
Araha.38918s0005 10.0kb upstream 10.0kb upstream 2067 true Scaffold38918: 6483-8549 Arabidopsis halleri
Araha.38918s0005 10.0kb upstream 10.0kb upstream 84 false Scaffold38918: 8466-8549 Arabidopsis halleri
Araha.38918s0005 10.0kb downstream 10.0kb downstream 8465 true Scaffold38918: 1-8465 Arabidopsis halleri
Araha.38918s0005 10.0kb downstream 10.0kb downstream 6482 false Scaffold38918: 1-6482 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377617 5261 Brassicaceae View MSA
123833149 5264 Brassicales-Malvales View MSA
124338544 5266 SBM View MSA
124244037 5268 Malvidae View MSA
124065033 5270 Rosid View MSA
123748708 5271 Pentapetalae View MSA
122790262 5272 Eudicot View MSA
122043218 5273 Angiosperm View MSA
121347730 5274 Embryophyte View MSA
123428667 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain