Gene : Araha.39199s0001 A. halleri v1.1
Defline:  (1 of 1) PTHR31235:SF39 - PEROXIDASE 3-RELATED Genomic Order:  1
Name:  ? Araha.39199s0001 Secondary Identifier:  ? PAC:28840148
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-5466 Arabidopsis halleri pathologic  
Ahalleri PWY-7214 Arabidopsis halleri pathologic  
Ahalleri PWY-7445 Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.39199s0001 0.5kb upstream 0.5kb upstream 2142 true Scaffold39199: 64-2205 Arabidopsis halleri
Araha.39199s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold39199: 64-563 Arabidopsis halleri
Araha.39199s0001 0.5kb downstream 0.5kb downstream 2142 true Scaffold39199: 564-2705 Arabidopsis halleri
Araha.39199s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold39199: 2206-2705 Arabidopsis halleri
Araha.39199s0001 1.0kb upstream 1.0kb upstream 2205 true Scaffold39199: 1-2205 Arabidopsis halleri
Araha.39199s0001 1.0kb upstream 1.0kb upstream 563 false Scaffold39199: 1-563 Arabidopsis halleri
Araha.39199s0001 1.0kb downstream 1.0kb downstream 2642 true Scaffold39199: 564-3205 Arabidopsis halleri
Araha.39199s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold39199: 2206-3205 Arabidopsis halleri
Araha.39199s0001 2.0kb upstream 2.0kb upstream 2205 true Scaffold39199: 1-2205 Arabidopsis halleri
Araha.39199s0001 2.0kb upstream 2.0kb upstream 563 false Scaffold39199: 1-563 Arabidopsis halleri
Araha.39199s0001 2.0kb downstream 2.0kb downstream 3642 true Scaffold39199: 564-4205 Arabidopsis halleri
Araha.39199s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold39199: 2206-4205 Arabidopsis halleri
Araha.39199s0001 5.0kb upstream 5.0kb upstream 2205 true Scaffold39199: 1-2205 Arabidopsis halleri
Araha.39199s0001 5.0kb upstream 5.0kb upstream 563 false Scaffold39199: 1-563 Arabidopsis halleri
Araha.39199s0001 5.0kb downstream 5.0kb downstream 6642 true Scaffold39199: 564-7205 Arabidopsis halleri
Araha.39199s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold39199: 2206-7205 Arabidopsis halleri
Araha.39199s0001 10.0kb upstream 10.0kb upstream 2205 true Scaffold39199: 1-2205 Arabidopsis halleri
Araha.39199s0001 10.0kb upstream 10.0kb upstream 563 false Scaffold39199: 1-563 Arabidopsis halleri
Araha.39199s0001 10.0kb downstream 10.0kb downstream 11642 true Scaffold39199: 564-12205 Arabidopsis halleri
Araha.39199s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold39199: 2206-12205 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369858 5261 Brassicaceae View MSA
123838755 5264 Brassicales-Malvales View MSA
124341557 5266 SBM View MSA
124250593 5268 Malvidae View MSA
124071148 5270 Rosid View MSA
123748177 5271 Pentapetalae View MSA
122794454 5272 Eudicot View MSA
122051577 5273 Angiosperm View MSA
121351674 5274 Embryophyte View MSA
123426672 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain