Gene : Araha.38355s0001 A. halleri v1.1
Defline:  (1 of 1) 4.2.1.122 - Tryptophan synthase (indole-salvaging) / Tryptophan synthase beta-2 Genomic Order:  1
Name:  ? Araha.38355s0001 Secondary Identifier:  ? PAC:28837962
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri TRPSYN-PWY Arabidopsis halleri pathologic  

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.38355s0001 0.5kb upstream 0.5kb upstream 2141 true Scaffold38355: 1-2141 Arabidopsis halleri
Araha.38355s0001 0.5kb upstream 0.5kb upstream 2 false Scaffold38355: 1-2 Arabidopsis halleri
Araha.38355s0001 0.5kb downstream 0.5kb downstream 2140 true Scaffold38355: 3-2142 Arabidopsis halleri
Araha.38355s0001 0.5kb downstream 0.5kb downstream 1 false Scaffold38355: 2142-2142 Arabidopsis halleri
Araha.38355s0001 1.0kb upstream 1.0kb upstream 2141 true Scaffold38355: 1-2141 Arabidopsis halleri
Araha.38355s0001 1.0kb upstream 1.0kb upstream 2 false Scaffold38355: 1-2 Arabidopsis halleri
Araha.38355s0001 1.0kb downstream 1.0kb downstream 2140 true Scaffold38355: 3-2142 Arabidopsis halleri
Araha.38355s0001 1.0kb downstream 1.0kb downstream 1 false Scaffold38355: 2142-2142 Arabidopsis halleri
Araha.38355s0001 2.0kb upstream 2.0kb upstream 2141 true Scaffold38355: 1-2141 Arabidopsis halleri
Araha.38355s0001 2.0kb upstream 2.0kb upstream 2 false Scaffold38355: 1-2 Arabidopsis halleri
Araha.38355s0001 2.0kb downstream 2.0kb downstream 2140 true Scaffold38355: 3-2142 Arabidopsis halleri
Araha.38355s0001 2.0kb downstream 2.0kb downstream 1 false Scaffold38355: 2142-2142 Arabidopsis halleri
Araha.38355s0001 5.0kb upstream 5.0kb upstream 2141 true Scaffold38355: 1-2141 Arabidopsis halleri
Araha.38355s0001 5.0kb upstream 5.0kb upstream 2 false Scaffold38355: 1-2 Arabidopsis halleri
Araha.38355s0001 5.0kb downstream 5.0kb downstream 2140 true Scaffold38355: 3-2142 Arabidopsis halleri
Araha.38355s0001 5.0kb downstream 5.0kb downstream 1 false Scaffold38355: 2142-2142 Arabidopsis halleri
Araha.38355s0001 10.0kb upstream 10.0kb upstream 2141 true Scaffold38355: 1-2141 Arabidopsis halleri
Araha.38355s0001 10.0kb upstream 10.0kb upstream 2 false Scaffold38355: 1-2 Arabidopsis halleri
Araha.38355s0001 10.0kb downstream 10.0kb downstream 2140 true Scaffold38355: 3-2142 Arabidopsis halleri
Araha.38355s0001 10.0kb downstream 10.0kb downstream 1 false Scaffold38355: 2142-2142 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361584 5261 Brassicaceae View MSA
123840024 5264 Brassicales-Malvales View MSA
124344821 5266 SBM View MSA
124242166 5268 Malvidae View MSA
124065122 5270 Rosid View MSA
123740538 5271 Pentapetalae View MSA
122790993 5272 Eudicot View MSA
122043348 5273 Angiosperm View MSA
121348084 5274 Embryophyte View MSA
123380724 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain