Gene : Araha.38372s0008 A. halleri v1.1

Defline:  (1 of 1) PTHR11627:SF8 - FRUCTOSE-BISPHOSPHATE ALDOLASE 3, CHLOROPLASTIC-RELATED Genomic Order:  8
Name:  ? Araha.38372s0008 Secondary Identifier:  ? PAC:28848920

Sequence Feature Displayer

Ontology Annotation Displayer

9 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri ANAEROFRUCAT-PWY Arabidopsis halleri pathologic  
Ahalleri ANAGLYCOLYSIS-PWY Arabidopsis halleri pathologic  
Ahalleri CALVIN-PWY Arabidopsis halleri pathologic  
Ahalleri GLUCONEO-PWY Arabidopsis halleri pathologic  
Ahalleri PHOTOALL-PWY Arabidopsis halleri pathologic  
Ahalleri PWY-1042 Arabidopsis halleri pathologic  
Ahalleri PWY-5464 Arabidopsis halleri pathologic  
Ahalleri PWY66-373 Arabidopsis halleri pathologic  
Ahalleri SUCSYN-PWY Arabidopsis halleri pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.38372s0008 0.5kb upstream 0.5kb upstream 1564 true Scaffold38372: 23476-25039 Arabidopsis halleri
Araha.38372s0008 0.5kb upstream 0.5kb upstream 148 false Scaffold38372: 24892-25039 Arabidopsis halleri
Araha.38372s0008 0.5kb downstream 0.5kb downstream 1916 true Scaffold38372: 22976-24891 Arabidopsis halleri
Araha.38372s0008 0.5kb downstream 0.5kb downstream 500 false Scaffold38372: 22976-23475 Arabidopsis halleri
Araha.38372s0008 1.0kb upstream 1.0kb upstream 1564 true Scaffold38372: 23476-25039 Arabidopsis halleri
Araha.38372s0008 1.0kb upstream 1.0kb upstream 148 false Scaffold38372: 24892-25039 Arabidopsis halleri
Araha.38372s0008 1.0kb downstream 1.0kb downstream 2416 true Scaffold38372: 22476-24891 Arabidopsis halleri
Araha.38372s0008 1.0kb downstream 1.0kb downstream 1000 false Scaffold38372: 22476-23475 Arabidopsis halleri
Araha.38372s0008 2.0kb upstream 2.0kb upstream 1564 true Scaffold38372: 23476-25039 Arabidopsis halleri
Araha.38372s0008 2.0kb upstream 2.0kb upstream 148 false Scaffold38372: 24892-25039 Arabidopsis halleri
Araha.38372s0008 2.0kb downstream 2.0kb downstream 3416 true Scaffold38372: 21476-24891 Arabidopsis halleri
Araha.38372s0008 2.0kb downstream 2.0kb downstream 2000 false Scaffold38372: 21476-23475 Arabidopsis halleri
Araha.38372s0008 5.0kb upstream 5.0kb upstream 1564 true Scaffold38372: 23476-25039 Arabidopsis halleri
Araha.38372s0008 5.0kb upstream 5.0kb upstream 148 false Scaffold38372: 24892-25039 Arabidopsis halleri
Araha.38372s0008 5.0kb downstream 5.0kb downstream 6416 true Scaffold38372: 18476-24891 Arabidopsis halleri
Araha.38372s0008 5.0kb downstream 5.0kb downstream 5000 false Scaffold38372: 18476-23475 Arabidopsis halleri
Araha.38372s0008 10.0kb upstream 10.0kb upstream 1564 true Scaffold38372: 23476-25039 Arabidopsis halleri
Araha.38372s0008 10.0kb upstream 10.0kb upstream 148 false Scaffold38372: 24892-25039 Arabidopsis halleri
Araha.38372s0008 10.0kb downstream 10.0kb downstream 11416 true Scaffold38372: 13476-24891 Arabidopsis halleri
Araha.38372s0008 10.0kb downstream 10.0kb downstream 10000 false Scaffold38372: 13476-23475 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373193 5261 Brassicaceae View MSA
123828058 5264 Brassicales-Malvales View MSA
124343223 5266 SBM View MSA
124244605 5268 Malvidae View MSA
124069125 5270 Rosid View MSA
123742159 5271 Pentapetalae View MSA
122788432 5272 Eudicot View MSA
122043152 5273 Angiosperm View MSA
121348633 5274 Embryophyte View MSA
123424623 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain