Gene : Araha.40396s0002 A. halleri v1.1

Defline:  (1 of 2) PTHR10891:SF638 - CALCIUM-BINDING PROTEIN CML15-RELATED Genomic Order:  2
Name:  ? Araha.40396s0002 Secondary Identifier:  ? PAC:28852240

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.40396s0002 0.5kb upstream 0.5kb upstream 1237 true Scaffold40396: 4014-5250 Arabidopsis halleri
Araha.40396s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold40396: 4014-4513 Arabidopsis halleri
Araha.40396s0002 0.5kb downstream 0.5kb downstream 1237 true Scaffold40396: 4514-5750 Arabidopsis halleri
Araha.40396s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold40396: 5251-5750 Arabidopsis halleri
Araha.40396s0002 1.0kb upstream 1.0kb upstream 1737 true Scaffold40396: 3514-5250 Arabidopsis halleri
Araha.40396s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold40396: 3514-4513 Arabidopsis halleri
Araha.40396s0002 1.0kb downstream 1.0kb downstream 1737 true Scaffold40396: 4514-6250 Arabidopsis halleri
Araha.40396s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold40396: 5251-6250 Arabidopsis halleri
Araha.40396s0002 2.0kb upstream 2.0kb upstream 2737 true Scaffold40396: 2514-5250 Arabidopsis halleri
Araha.40396s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold40396: 2514-4513 Arabidopsis halleri
Araha.40396s0002 2.0kb downstream 2.0kb downstream 2737 true Scaffold40396: 4514-7250 Arabidopsis halleri
Araha.40396s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold40396: 5251-7250 Arabidopsis halleri
Araha.40396s0002 5.0kb upstream 5.0kb upstream 5250 true Scaffold40396: 1-5250 Arabidopsis halleri
Araha.40396s0002 5.0kb upstream 5.0kb upstream 4513 false Scaffold40396: 1-4513 Arabidopsis halleri
Araha.40396s0002 5.0kb downstream 5.0kb downstream 5737 true Scaffold40396: 4514-10250 Arabidopsis halleri
Araha.40396s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold40396: 5251-10250 Arabidopsis halleri
Araha.40396s0002 10.0kb upstream 10.0kb upstream 5250 true Scaffold40396: 1-5250 Arabidopsis halleri
Araha.40396s0002 10.0kb upstream 10.0kb upstream 4513 false Scaffold40396: 1-4513 Arabidopsis halleri
Araha.40396s0002 10.0kb downstream 10.0kb downstream 8050 true Scaffold40396: 4514-12563 Arabidopsis halleri
Araha.40396s0002 10.0kb downstream 10.0kb downstream 7313 false Scaffold40396: 5251-12563 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369859 5261 Brassicaceae View MSA
123835245 5264 Brassicales-Malvales View MSA
124342324 5266 SBM View MSA
124248216 5268 Malvidae View MSA
124065956 5270 Rosid View MSA
123753039 5271 Pentapetalae View MSA
122786737 5272 Eudicot View MSA
122047727 5273 Angiosperm View MSA
121350745 5274 Embryophyte View MSA
123381869 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain