Gene : Araha.40374s0001 A. halleri v1.1
Defline:  (1 of 2) PTHR10209:SF127 - 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN Genomic Order:  1
Name:  ? Araha.40374s0001 Secondary Identifier:  ? PAC:28861429
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.40374s0001 0.5kb upstream 0.5kb upstream 2362 true Scaffold40374: 1320-3681 Arabidopsis halleri
Araha.40374s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold40374: 3182-3681 Arabidopsis halleri
Araha.40374s0001 0.5kb downstream 0.5kb downstream 2362 true Scaffold40374: 820-3181 Arabidopsis halleri
Araha.40374s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold40374: 820-1319 Arabidopsis halleri
Araha.40374s0001 1.0kb upstream 1.0kb upstream 2862 true Scaffold40374: 1320-4181 Arabidopsis halleri
Araha.40374s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold40374: 3182-4181 Arabidopsis halleri
Araha.40374s0001 1.0kb downstream 1.0kb downstream 2862 true Scaffold40374: 320-3181 Arabidopsis halleri
Araha.40374s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold40374: 320-1319 Arabidopsis halleri
Araha.40374s0001 2.0kb upstream 2.0kb upstream 3862 true Scaffold40374: 1320-5181 Arabidopsis halleri
Araha.40374s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold40374: 3182-5181 Arabidopsis halleri
Araha.40374s0001 2.0kb downstream 2.0kb downstream 3181 true Scaffold40374: 1-3181 Arabidopsis halleri
Araha.40374s0001 2.0kb downstream 2.0kb downstream 1319 false Scaffold40374: 1-1319 Arabidopsis halleri
Araha.40374s0001 5.0kb upstream 5.0kb upstream 6862 true Scaffold40374: 1320-8181 Arabidopsis halleri
Araha.40374s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold40374: 3182-8181 Arabidopsis halleri
Araha.40374s0001 5.0kb downstream 5.0kb downstream 3181 true Scaffold40374: 1-3181 Arabidopsis halleri
Araha.40374s0001 5.0kb downstream 5.0kb downstream 1319 false Scaffold40374: 1-1319 Arabidopsis halleri
Araha.40374s0001 10.0kb upstream 10.0kb upstream 11862 true Scaffold40374: 1320-13181 Arabidopsis halleri
Araha.40374s0001 10.0kb upstream 10.0kb upstream 10000 false Scaffold40374: 3182-13181 Arabidopsis halleri
Araha.40374s0001 10.0kb downstream 10.0kb downstream 3181 true Scaffold40374: 1-3181 Arabidopsis halleri
Araha.40374s0001 10.0kb downstream 10.0kb downstream 1319 false Scaffold40374: 1-1319 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360730 5261 Brassicaceae View MSA
123840503 5264 Brassicales-Malvales View MSA
124351473 5266 SBM View MSA
124247576 5268 Malvidae View MSA
124074691 5270 Rosid View MSA
123748352 5271 Pentapetalae View MSA
122795529 5272 Eudicot View MSA
122043362 5273 Angiosperm View MSA
123429101 5275 Viridiplantae View MSA
121349353 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain