Gene : Araha.40371s0001 A. halleri v1.1
Defline:  (1 of 2) PTHR31080:SF9 - INVERTASE/PECTIN METHYLESTERASE INHIBITOR FAMILY PROTEIN / DC 1.2-LIKE PROTEIN-RELATED Genomic Order:  1
Name:  ? Araha.40371s0001 Secondary Identifier:  ? PAC:28846999
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-1081 Arabidopsis halleri pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.40371s0001 0.5kb upstream 0.5kb upstream 5129 true Scaffold40371: 394-5522 Arabidopsis halleri
Araha.40371s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold40371: 394-893 Arabidopsis halleri
Araha.40371s0001 0.5kb downstream 0.5kb downstream 5129 true Scaffold40371: 894-6022 Arabidopsis halleri
Araha.40371s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold40371: 5523-6022 Arabidopsis halleri
Araha.40371s0001 1.0kb upstream 1.0kb upstream 5522 true Scaffold40371: 1-5522 Arabidopsis halleri
Araha.40371s0001 1.0kb upstream 1.0kb upstream 893 false Scaffold40371: 1-893 Arabidopsis halleri
Araha.40371s0001 1.0kb downstream 1.0kb downstream 5278 true Scaffold40371: 894-6171 Arabidopsis halleri
Araha.40371s0001 1.0kb downstream 1.0kb downstream 649 false Scaffold40371: 5523-6171 Arabidopsis halleri
Araha.40371s0001 2.0kb upstream 2.0kb upstream 5522 true Scaffold40371: 1-5522 Arabidopsis halleri
Araha.40371s0001 2.0kb upstream 2.0kb upstream 893 false Scaffold40371: 1-893 Arabidopsis halleri
Araha.40371s0001 2.0kb downstream 2.0kb downstream 5278 true Scaffold40371: 894-6171 Arabidopsis halleri
Araha.40371s0001 2.0kb downstream 2.0kb downstream 649 false Scaffold40371: 5523-6171 Arabidopsis halleri
Araha.40371s0001 5.0kb upstream 5.0kb upstream 5522 true Scaffold40371: 1-5522 Arabidopsis halleri
Araha.40371s0001 5.0kb upstream 5.0kb upstream 893 false Scaffold40371: 1-893 Arabidopsis halleri
Araha.40371s0001 5.0kb downstream 5.0kb downstream 5278 true Scaffold40371: 894-6171 Arabidopsis halleri
Araha.40371s0001 5.0kb downstream 5.0kb downstream 649 false Scaffold40371: 5523-6171 Arabidopsis halleri
Araha.40371s0001 10.0kb upstream 10.0kb upstream 5522 true Scaffold40371: 1-5522 Arabidopsis halleri
Araha.40371s0001 10.0kb upstream 10.0kb upstream 893 false Scaffold40371: 1-893 Arabidopsis halleri
Araha.40371s0001 10.0kb downstream 10.0kb downstream 5278 true Scaffold40371: 894-6171 Arabidopsis halleri
Araha.40371s0001 10.0kb downstream 10.0kb downstream 649 false Scaffold40371: 5523-6171 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376892 5261 Brassicaceae View MSA
123829833 5264 Brassicales-Malvales View MSA
124349206 5266 SBM View MSA
124242648 5268 Malvidae View MSA
124061401 5270 Rosid View MSA
123751304 5271 Pentapetalae View MSA
122797599 5272 Eudicot View MSA
122046899 5273 Angiosperm View MSA
121310670 5274 Embryophyte View MSA
123348096 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain