Gene : Araha.40961s0001 A. halleri v1.1

Defline:  (1 of 32) PF03195 - Protein of unknown function DUF260 (DUF260) Genomic Order:  1
Name:  ? Araha.40961s0001 Secondary Identifier:  ? PAC:28841597

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.40961s0001 0.5kb upstream 0.5kb upstream 1111 true Scaffold40961: 627-1737 Arabidopsis halleri
Araha.40961s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold40961: 1238-1737 Arabidopsis halleri
Araha.40961s0001 0.5kb downstream 0.5kb downstream 1111 true Scaffold40961: 127-1237 Arabidopsis halleri
Araha.40961s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold40961: 127-626 Arabidopsis halleri
Araha.40961s0001 1.0kb upstream 1.0kb upstream 1611 true Scaffold40961: 627-2237 Arabidopsis halleri
Araha.40961s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold40961: 1238-2237 Arabidopsis halleri
Araha.40961s0001 1.0kb downstream 1.0kb downstream 1237 true Scaffold40961: 1-1237 Arabidopsis halleri
Araha.40961s0001 1.0kb downstream 1.0kb downstream 626 false Scaffold40961: 1-626 Arabidopsis halleri
Araha.40961s0001 2.0kb upstream 2.0kb upstream 2611 true Scaffold40961: 627-3237 Arabidopsis halleri
Araha.40961s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold40961: 1238-3237 Arabidopsis halleri
Araha.40961s0001 2.0kb downstream 2.0kb downstream 1237 true Scaffold40961: 1-1237 Arabidopsis halleri
Araha.40961s0001 2.0kb downstream 2.0kb downstream 626 false Scaffold40961: 1-626 Arabidopsis halleri
Araha.40961s0001 5.0kb upstream 5.0kb upstream 2909 true Scaffold40961: 627-3535 Arabidopsis halleri
Araha.40961s0001 5.0kb upstream 5.0kb upstream 2298 false Scaffold40961: 1238-3535 Arabidopsis halleri
Araha.40961s0001 5.0kb downstream 5.0kb downstream 1237 true Scaffold40961: 1-1237 Arabidopsis halleri
Araha.40961s0001 5.0kb downstream 5.0kb downstream 626 false Scaffold40961: 1-626 Arabidopsis halleri
Araha.40961s0001 10.0kb upstream 10.0kb upstream 2909 true Scaffold40961: 627-3535 Arabidopsis halleri
Araha.40961s0001 10.0kb upstream 10.0kb upstream 2298 false Scaffold40961: 1238-3535 Arabidopsis halleri
Araha.40961s0001 10.0kb downstream 10.0kb downstream 1237 true Scaffold40961: 1-1237 Arabidopsis halleri
Araha.40961s0001 10.0kb downstream 10.0kb downstream 626 false Scaffold40961: 1-626 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380519 5261 Brassicaceae View MSA
123802760 5264 Brassicales-Malvales View MSA
124299927 5266 SBM View MSA
124255624 5268 Malvidae View MSA
124072898 5270 Rosid View MSA
123752210 5271 Pentapetalae View MSA
122796223 5272 Eudicot View MSA
122048133 5273 Angiosperm View MSA
121350574 5274 Embryophyte View MSA
123381803 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain