Gene : Araha.42531s0004 A. halleri v1.1

Defline:  (1 of 2) PTHR10555//PTHR10555:SF155 - SORTING NEXIN Genomic Order:  4
Name:  ? Araha.42531s0004 Secondary Identifier:  ? PAC:28839290

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.42531s0004 0.5kb upstream 0.5kb upstream 3470 true Scaffold42531: 16778-20247 Arabidopsis halleri
Araha.42531s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold42531: 19748-20247 Arabidopsis halleri
Araha.42531s0004 0.5kb downstream 0.5kb downstream 3470 true Scaffold42531: 16278-19747 Arabidopsis halleri
Araha.42531s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold42531: 16278-16777 Arabidopsis halleri
Araha.42531s0004 1.0kb upstream 1.0kb upstream 3970 true Scaffold42531: 16778-20747 Arabidopsis halleri
Araha.42531s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold42531: 19748-20747 Arabidopsis halleri
Araha.42531s0004 1.0kb downstream 1.0kb downstream 3970 true Scaffold42531: 15778-19747 Arabidopsis halleri
Araha.42531s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold42531: 15778-16777 Arabidopsis halleri
Araha.42531s0004 2.0kb upstream 2.0kb upstream 4970 true Scaffold42531: 16778-21747 Arabidopsis halleri
Araha.42531s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold42531: 19748-21747 Arabidopsis halleri
Araha.42531s0004 2.0kb downstream 2.0kb downstream 4970 true Scaffold42531: 14778-19747 Arabidopsis halleri
Araha.42531s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold42531: 14778-16777 Arabidopsis halleri
Araha.42531s0004 5.0kb upstream 5.0kb upstream 7970 true Scaffold42531: 16778-24747 Arabidopsis halleri
Araha.42531s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold42531: 19748-24747 Arabidopsis halleri
Araha.42531s0004 5.0kb downstream 5.0kb downstream 7970 true Scaffold42531: 11778-19747 Arabidopsis halleri
Araha.42531s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold42531: 11778-16777 Arabidopsis halleri
Araha.42531s0004 10.0kb upstream 10.0kb upstream 11481 true Scaffold42531: 16778-28258 Arabidopsis halleri
Araha.42531s0004 10.0kb upstream 10.0kb upstream 8511 false Scaffold42531: 19748-28258 Arabidopsis halleri
Araha.42531s0004 10.0kb downstream 10.0kb downstream 12970 true Scaffold42531: 6778-19747 Arabidopsis halleri
Araha.42531s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold42531: 6778-16777 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041026 5273 Angiosperm View MSA
122367695 5261 Brassicaceae View MSA
123834028 5264 Brassicales-Malvales View MSA
124349642 5266 SBM View MSA
124237314 5268 Malvidae View MSA
124063344 5270 Rosid View MSA
123749355 5271 Pentapetalae View MSA
122789384 5272 Eudicot View MSA
121345182 5274 Embryophyte View MSA
123428162 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain