Gene : Araha.44131s0001 A. halleri v1.1

Defline:  (1 of 20) PF03140 - Plant protein of unknown function (DUF247) Genomic Order:  1
Name:  ? Araha.44131s0001 Secondary Identifier:  ? PAC:28849485

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

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Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.44131s0001 0.5kb upstream 0.5kb upstream 1697 true Scaffold44131: 1-1697 Arabidopsis halleri
Araha.44131s0001 0.5kb upstream 0.5kb upstream 341 false Scaffold44131: 1-341 Arabidopsis halleri
Araha.44131s0001 0.5kb downstream 0.5kb downstream 1856 true Scaffold44131: 342-2197 Arabidopsis halleri
Araha.44131s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold44131: 1698-2197 Arabidopsis halleri
Araha.44131s0001 1.0kb upstream 1.0kb upstream 1697 true Scaffold44131: 1-1697 Arabidopsis halleri
Araha.44131s0001 1.0kb upstream 1.0kb upstream 341 false Scaffold44131: 1-341 Arabidopsis halleri
Araha.44131s0001 1.0kb downstream 1.0kb downstream 2356 true Scaffold44131: 342-2697 Arabidopsis halleri
Araha.44131s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold44131: 1698-2697 Arabidopsis halleri
Araha.44131s0001 2.0kb upstream 2.0kb upstream 1697 true Scaffold44131: 1-1697 Arabidopsis halleri
Araha.44131s0001 2.0kb upstream 2.0kb upstream 341 false Scaffold44131: 1-341 Arabidopsis halleri
Araha.44131s0001 2.0kb downstream 2.0kb downstream 3356 true Scaffold44131: 342-3697 Arabidopsis halleri
Araha.44131s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold44131: 1698-3697 Arabidopsis halleri
Araha.44131s0001 5.0kb upstream 5.0kb upstream 1697 true Scaffold44131: 1-1697 Arabidopsis halleri
Araha.44131s0001 5.0kb upstream 5.0kb upstream 341 false Scaffold44131: 1-341 Arabidopsis halleri
Araha.44131s0001 5.0kb downstream 5.0kb downstream 6356 true Scaffold44131: 342-6697 Arabidopsis halleri
Araha.44131s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold44131: 1698-6697 Arabidopsis halleri
Araha.44131s0001 10.0kb upstream 10.0kb upstream 1697 true Scaffold44131: 1-1697 Arabidopsis halleri
Araha.44131s0001 10.0kb upstream 10.0kb upstream 341 false Scaffold44131: 1-341 Arabidopsis halleri
Araha.44131s0001 10.0kb downstream 10.0kb downstream 6483 true Scaffold44131: 342-6824 Arabidopsis halleri
Araha.44131s0001 10.0kb downstream 10.0kb downstream 5127 false Scaffold44131: 1698-6824 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379586 5261 Brassicaceae View MSA
123839578 5264 Brassicales-Malvales View MSA
124350743 5266 SBM View MSA
124254082 5268 Malvidae View MSA
124074599 5270 Rosid View MSA
123753721 5271 Pentapetalae View MSA
122797892 5272 Eudicot View MSA
122051031 5273 Angiosperm View MSA
121351531 5274 Embryophyte View MSA
123382209 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain