Gene : Araha.48281s0002 A. halleri v1.1

Defline:  (1 of 1) PTHR16092 - SEC3/SYNTAXIN-RELATED Genomic Order:  2
Name:  ? Araha.48281s0002 Secondary Identifier:  ? PAC:28862164

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.48281s0002 0.5kb upstream 0.5kb upstream 7261 true Scaffold48281: 1972-9232 Arabidopsis halleri
Araha.48281s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold48281: 8733-9232 Arabidopsis halleri
Araha.48281s0002 0.5kb downstream 0.5kb downstream 7261 true Scaffold48281: 1472-8732 Arabidopsis halleri
Araha.48281s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold48281: 1472-1971 Arabidopsis halleri
Araha.48281s0002 1.0kb upstream 1.0kb upstream 7761 true Scaffold48281: 1972-9732 Arabidopsis halleri
Araha.48281s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold48281: 8733-9732 Arabidopsis halleri
Araha.48281s0002 1.0kb downstream 1.0kb downstream 7761 true Scaffold48281: 972-8732 Arabidopsis halleri
Araha.48281s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold48281: 972-1971 Arabidopsis halleri
Araha.48281s0002 2.0kb upstream 2.0kb upstream 8761 true Scaffold48281: 1972-10732 Arabidopsis halleri
Araha.48281s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold48281: 8733-10732 Arabidopsis halleri
Araha.48281s0002 2.0kb downstream 2.0kb downstream 8732 true Scaffold48281: 1-8732 Arabidopsis halleri
Araha.48281s0002 2.0kb downstream 2.0kb downstream 1971 false Scaffold48281: 1-1971 Arabidopsis halleri
Araha.48281s0002 5.0kb upstream 5.0kb upstream 11652 true Scaffold48281: 1972-13623 Arabidopsis halleri
Araha.48281s0002 5.0kb upstream 5.0kb upstream 4891 false Scaffold48281: 8733-13623 Arabidopsis halleri
Araha.48281s0002 5.0kb downstream 5.0kb downstream 8732 true Scaffold48281: 1-8732 Arabidopsis halleri
Araha.48281s0002 5.0kb downstream 5.0kb downstream 1971 false Scaffold48281: 1-1971 Arabidopsis halleri
Araha.48281s0002 10.0kb upstream 10.0kb upstream 11652 true Scaffold48281: 1972-13623 Arabidopsis halleri
Araha.48281s0002 10.0kb upstream 10.0kb upstream 4891 false Scaffold48281: 8733-13623 Arabidopsis halleri
Araha.48281s0002 10.0kb downstream 10.0kb downstream 8732 true Scaffold48281: 1-8732 Arabidopsis halleri
Araha.48281s0002 10.0kb downstream 10.0kb downstream 1971 false Scaffold48281: 1-1971 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370442 5261 Brassicaceae View MSA
123833054 5264 Brassicales-Malvales View MSA
124342572 5266 SBM View MSA
124252372 5268 Malvidae View MSA
124062272 5270 Rosid View MSA
123744034 5271 Pentapetalae View MSA
122788203 5272 Eudicot View MSA
122043094 5273 Angiosperm View MSA
121346884 5274 Embryophyte View MSA
123428518 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain