Gene : Araha.48721s0001 A. halleri v1.1

Defline:  (1 of 2) PTHR35689:SF1 - F10B6.4 Genomic Order:  1
Name:  ? Araha.48721s0001 Secondary Identifier:  ? PAC:28854814

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.48721s0001 0.5kb upstream 0.5kb upstream 2309 true Scaffold48721: 1-2309 Arabidopsis halleri
Araha.48721s0001 0.5kb upstream 0.5kb upstream 139 false Scaffold48721: 1-139 Arabidopsis halleri
Araha.48721s0001 0.5kb downstream 0.5kb downstream 2670 true Scaffold48721: 140-2809 Arabidopsis halleri
Araha.48721s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold48721: 2310-2809 Arabidopsis halleri
Araha.48721s0001 1.0kb upstream 1.0kb upstream 2309 true Scaffold48721: 1-2309 Arabidopsis halleri
Araha.48721s0001 1.0kb upstream 1.0kb upstream 139 false Scaffold48721: 1-139 Arabidopsis halleri
Araha.48721s0001 1.0kb downstream 1.0kb downstream 3170 true Scaffold48721: 140-3309 Arabidopsis halleri
Araha.48721s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold48721: 2310-3309 Arabidopsis halleri
Araha.48721s0001 2.0kb upstream 2.0kb upstream 2309 true Scaffold48721: 1-2309 Arabidopsis halleri
Araha.48721s0001 2.0kb upstream 2.0kb upstream 139 false Scaffold48721: 1-139 Arabidopsis halleri
Araha.48721s0001 2.0kb downstream 2.0kb downstream 4170 true Scaffold48721: 140-4309 Arabidopsis halleri
Araha.48721s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold48721: 2310-4309 Arabidopsis halleri
Araha.48721s0001 5.0kb upstream 5.0kb upstream 2309 true Scaffold48721: 1-2309 Arabidopsis halleri
Araha.48721s0001 5.0kb upstream 5.0kb upstream 139 false Scaffold48721: 1-139 Arabidopsis halleri
Araha.48721s0001 5.0kb downstream 5.0kb downstream 7170 true Scaffold48721: 140-7309 Arabidopsis halleri
Araha.48721s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold48721: 2310-7309 Arabidopsis halleri
Araha.48721s0001 10.0kb upstream 10.0kb upstream 2309 true Scaffold48721: 1-2309 Arabidopsis halleri
Araha.48721s0001 10.0kb upstream 10.0kb upstream 139 false Scaffold48721: 1-139 Arabidopsis halleri
Araha.48721s0001 10.0kb downstream 10.0kb downstream 12170 true Scaffold48721: 140-12309 Arabidopsis halleri
Araha.48721s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold48721: 2310-12309 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367553 5261 Brassicaceae View MSA
123838976 5264 Brassicales-Malvales View MSA
124344488 5266 SBM View MSA
124238731 5268 Malvidae View MSA
124061266 5270 Rosid View MSA
123741660 5271 Pentapetalae View MSA
122790535 5272 Eudicot View MSA
122047670 5273 Angiosperm View MSA
121344374 5274 Embryophyte View MSA
123380030 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain