Gene : Araha.48451s0001 A. halleri v1.1

Defline:  (1 of 3) PTHR33070:SF3 - EXPRESSED PROTEIN Genomic Order:  1
Name:  ? Araha.48451s0001 Secondary Identifier:  ? PAC:28862712

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.48451s0001 0.5kb upstream 0.5kb upstream 1265 true Scaffold48451: 1002-2266 Arabidopsis halleri
Araha.48451s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold48451: 1767-2266 Arabidopsis halleri
Araha.48451s0001 0.5kb downstream 0.5kb downstream 1265 true Scaffold48451: 502-1766 Arabidopsis halleri
Araha.48451s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold48451: 502-1001 Arabidopsis halleri
Araha.48451s0001 1.0kb upstream 1.0kb upstream 1765 true Scaffold48451: 1002-2766 Arabidopsis halleri
Araha.48451s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold48451: 1767-2766 Arabidopsis halleri
Araha.48451s0001 1.0kb downstream 1.0kb downstream 1765 true Scaffold48451: 2-1766 Arabidopsis halleri
Araha.48451s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold48451: 2-1001 Arabidopsis halleri
Araha.48451s0001 2.0kb upstream 2.0kb upstream 1992 true Scaffold48451: 1002-2993 Arabidopsis halleri
Araha.48451s0001 2.0kb upstream 2.0kb upstream 1227 false Scaffold48451: 1767-2993 Arabidopsis halleri
Araha.48451s0001 2.0kb downstream 2.0kb downstream 1766 true Scaffold48451: 1-1766 Arabidopsis halleri
Araha.48451s0001 2.0kb downstream 2.0kb downstream 1001 false Scaffold48451: 1-1001 Arabidopsis halleri
Araha.48451s0001 5.0kb upstream 5.0kb upstream 1992 true Scaffold48451: 1002-2993 Arabidopsis halleri
Araha.48451s0001 5.0kb upstream 5.0kb upstream 1227 false Scaffold48451: 1767-2993 Arabidopsis halleri
Araha.48451s0001 5.0kb downstream 5.0kb downstream 1766 true Scaffold48451: 1-1766 Arabidopsis halleri
Araha.48451s0001 5.0kb downstream 5.0kb downstream 1001 false Scaffold48451: 1-1001 Arabidopsis halleri
Araha.48451s0001 10.0kb upstream 10.0kb upstream 1992 true Scaffold48451: 1002-2993 Arabidopsis halleri
Araha.48451s0001 10.0kb upstream 10.0kb upstream 1227 false Scaffold48451: 1767-2993 Arabidopsis halleri
Araha.48451s0001 10.0kb downstream 10.0kb downstream 1766 true Scaffold48451: 1-1766 Arabidopsis halleri
Araha.48451s0001 10.0kb downstream 10.0kb downstream 1001 false Scaffold48451: 1-1001 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365949 5261 Brassicaceae View MSA
123799078 5264 Brassicales-Malvales View MSA
124296636 5266 SBM View MSA
124248071 5268 Malvidae View MSA
124069570 5270 Rosid View MSA
123753428 5271 Pentapetalae View MSA
122797760 5272 Eudicot View MSA
122043809 5273 Angiosperm View MSA
121310191 5274 Embryophyte View MSA
123347751 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain