Gene : Araha.47358s0001 A. halleri v1.1
Defline:  (1 of 1) PTHR11771:SF42 - PROTEIN C13C4.7 Genomic Order:  1
Name:  ? Araha.47358s0001 Secondary Identifier:  ? PAC:28861918
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-5409 Arabidopsis halleri pathologic  
Ahalleri PWY-5410 Arabidopsis halleri pathologic  
Ahalleri PWY-735 Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.47358s0001 0.5kb upstream 0.5kb upstream 5760 true Scaffold47358: 10318-16077 Arabidopsis halleri
Araha.47358s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold47358: 10318-10817 Arabidopsis halleri
Araha.47358s0001 0.5kb downstream 0.5kb downstream 5760 true Scaffold47358: 10818-16577 Arabidopsis halleri
Araha.47358s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold47358: 16078-16577 Arabidopsis halleri
Araha.47358s0001 1.0kb upstream 1.0kb upstream 6260 true Scaffold47358: 9818-16077 Arabidopsis halleri
Araha.47358s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold47358: 9818-10817 Arabidopsis halleri
Araha.47358s0001 1.0kb downstream 1.0kb downstream 6260 true Scaffold47358: 10818-17077 Arabidopsis halleri
Araha.47358s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold47358: 16078-17077 Arabidopsis halleri
Araha.47358s0001 2.0kb upstream 2.0kb upstream 7260 true Scaffold47358: 8818-16077 Arabidopsis halleri
Araha.47358s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold47358: 8818-10817 Arabidopsis halleri
Araha.47358s0001 2.0kb downstream 2.0kb downstream 7260 true Scaffold47358: 10818-18077 Arabidopsis halleri
Araha.47358s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold47358: 16078-18077 Arabidopsis halleri
Araha.47358s0001 5.0kb upstream 5.0kb upstream 10260 true Scaffold47358: 5818-16077 Arabidopsis halleri
Araha.47358s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold47358: 5818-10817 Arabidopsis halleri
Araha.47358s0001 5.0kb downstream 5.0kb downstream 9142 true Scaffold47358: 10818-19959 Arabidopsis halleri
Araha.47358s0001 5.0kb downstream 5.0kb downstream 3882 false Scaffold47358: 16078-19959 Arabidopsis halleri
Araha.47358s0001 10.0kb upstream 10.0kb upstream 15260 true Scaffold47358: 818-16077 Arabidopsis halleri
Araha.47358s0001 10.0kb upstream 10.0kb upstream 10000 false Scaffold47358: 818-10817 Arabidopsis halleri
Araha.47358s0001 10.0kb downstream 10.0kb downstream 9142 true Scaffold47358: 10818-19959 Arabidopsis halleri
Araha.47358s0001 10.0kb downstream 10.0kb downstream 3882 false Scaffold47358: 16078-19959 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363495 5261 Brassicaceae View MSA
123837104 5264 Brassicales-Malvales View MSA
124342225 5266 SBM View MSA
124251486 5268 Malvidae View MSA
124069762 5270 Rosid View MSA
123743667 5271 Pentapetalae View MSA
122789767 5272 Eudicot View MSA
122043119 5273 Angiosperm View MSA
123429188 5275 Viridiplantae View MSA
121351701 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain