Gene : Araha.47708s0003 A. halleri v1.1

Defline:  (1 of 1) PTHR35696:SF1 - F6N18.11 Genomic Order:  3
Name:  ? Araha.47708s0003 Secondary Identifier:  ? PAC:28845960

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.47708s0003 0.5kb upstream 0.5kb upstream 2804 true Scaffold47708: 14308-17111 Arabidopsis halleri
Araha.47708s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold47708: 14308-14807 Arabidopsis halleri
Araha.47708s0003 0.5kb downstream 0.5kb downstream 2804 true Scaffold47708: 14808-17611 Arabidopsis halleri
Araha.47708s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold47708: 17112-17611 Arabidopsis halleri
Araha.47708s0003 1.0kb upstream 1.0kb upstream 3304 true Scaffold47708: 13808-17111 Arabidopsis halleri
Araha.47708s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold47708: 13808-14807 Arabidopsis halleri
Araha.47708s0003 1.0kb downstream 1.0kb downstream 3304 true Scaffold47708: 14808-18111 Arabidopsis halleri
Araha.47708s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold47708: 17112-18111 Arabidopsis halleri
Araha.47708s0003 2.0kb upstream 2.0kb upstream 4304 true Scaffold47708: 12808-17111 Arabidopsis halleri
Araha.47708s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold47708: 12808-14807 Arabidopsis halleri
Araha.47708s0003 2.0kb downstream 2.0kb downstream 4304 true Scaffold47708: 14808-19111 Arabidopsis halleri
Araha.47708s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold47708: 17112-19111 Arabidopsis halleri
Araha.47708s0003 5.0kb upstream 5.0kb upstream 7304 true Scaffold47708: 9808-17111 Arabidopsis halleri
Araha.47708s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold47708: 9808-14807 Arabidopsis halleri
Araha.47708s0003 5.0kb downstream 5.0kb downstream 7304 true Scaffold47708: 14808-22111 Arabidopsis halleri
Araha.47708s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold47708: 17112-22111 Arabidopsis halleri
Araha.47708s0003 10.0kb upstream 10.0kb upstream 12304 true Scaffold47708: 4808-17111 Arabidopsis halleri
Araha.47708s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold47708: 4808-14807 Arabidopsis halleri
Araha.47708s0003 10.0kb downstream 10.0kb downstream 12304 true Scaffold47708: 14808-27111 Arabidopsis halleri
Araha.47708s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold47708: 17112-27111 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362940 5261 Brassicaceae View MSA
123833580 5264 Brassicales-Malvales View MSA
124338367 5266 SBM View MSA
124240573 5268 Malvidae View MSA
124064498 5270 Rosid View MSA
123736423 5271 Pentapetalae View MSA
122788137 5272 Eudicot View MSA
122047487 5273 Angiosperm View MSA
121350901 5274 Embryophyte View MSA
123381932 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain