Gene : Araha.49879s0006 A. halleri v1.1

Defline:  (1 of 1) PTHR10174//PTHR10174:SF151 - RETINALDEHYDE BINDING PROTEIN-RELATED Genomic Order:  6
Name:  ? Araha.49879s0006 Secondary Identifier:  ? PAC:28839870

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.49879s0006 0.5kb upstream 0.5kb upstream 2678 true Scaffold49879: 17187-19864 Arabidopsis halleri
Araha.49879s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold49879: 19365-19864 Arabidopsis halleri
Araha.49879s0006 0.5kb downstream 0.5kb downstream 2678 true Scaffold49879: 16687-19364 Arabidopsis halleri
Araha.49879s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold49879: 16687-17186 Arabidopsis halleri
Araha.49879s0006 1.0kb upstream 1.0kb upstream 3178 true Scaffold49879: 17187-20364 Arabidopsis halleri
Araha.49879s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold49879: 19365-20364 Arabidopsis halleri
Araha.49879s0006 1.0kb downstream 1.0kb downstream 3178 true Scaffold49879: 16187-19364 Arabidopsis halleri
Araha.49879s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold49879: 16187-17186 Arabidopsis halleri
Araha.49879s0006 2.0kb upstream 2.0kb upstream 4178 true Scaffold49879: 17187-21364 Arabidopsis halleri
Araha.49879s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold49879: 19365-21364 Arabidopsis halleri
Araha.49879s0006 2.0kb downstream 2.0kb downstream 4178 true Scaffold49879: 15187-19364 Arabidopsis halleri
Araha.49879s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold49879: 15187-17186 Arabidopsis halleri
Araha.49879s0006 5.0kb upstream 5.0kb upstream 7178 true Scaffold49879: 17187-24364 Arabidopsis halleri
Araha.49879s0006 5.0kb upstream 5.0kb upstream 5000 false Scaffold49879: 19365-24364 Arabidopsis halleri
Araha.49879s0006 5.0kb downstream 5.0kb downstream 7178 true Scaffold49879: 12187-19364 Arabidopsis halleri
Araha.49879s0006 5.0kb downstream 5.0kb downstream 5000 false Scaffold49879: 12187-17186 Arabidopsis halleri
Araha.49879s0006 10.0kb upstream 10.0kb upstream 12178 true Scaffold49879: 17187-29364 Arabidopsis halleri
Araha.49879s0006 10.0kb upstream 10.0kb upstream 10000 false Scaffold49879: 19365-29364 Arabidopsis halleri
Araha.49879s0006 10.0kb downstream 10.0kb downstream 12178 true Scaffold49879: 7187-19364 Arabidopsis halleri
Araha.49879s0006 10.0kb downstream 10.0kb downstream 10000 false Scaffold49879: 7187-17186 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368363 5261 Brassicaceae View MSA
123833912 5264 Brassicales-Malvales View MSA
124339104 5266 SBM View MSA
124250312 5268 Malvidae View MSA
124068737 5270 Rosid View MSA
123747971 5271 Pentapetalae View MSA
122789052 5272 Eudicot View MSA
122046588 5273 Angiosperm View MSA
121350309 5274 Embryophyte View MSA
123427540 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain