Gene : Araha.49879s0003 A. halleri v1.1
Defline:  (1 of 1) PTHR13930 - RSAFD1-RELATED Genomic Order:  3
Name:  ? Araha.49879s0003 Secondary Identifier:  ? PAC:28839880
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-7286 Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.49879s0003 0.5kb upstream 0.5kb upstream 3590 true Scaffold49879: 8707-12296 Arabidopsis halleri
Araha.49879s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold49879: 8707-9206 Arabidopsis halleri
Araha.49879s0003 0.5kb downstream 0.5kb downstream 3590 true Scaffold49879: 9207-12796 Arabidopsis halleri
Araha.49879s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold49879: 12297-12796 Arabidopsis halleri
Araha.49879s0003 1.0kb upstream 1.0kb upstream 4090 true Scaffold49879: 8207-12296 Arabidopsis halleri
Araha.49879s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold49879: 8207-9206 Arabidopsis halleri
Araha.49879s0003 1.0kb downstream 1.0kb downstream 4090 true Scaffold49879: 9207-13296 Arabidopsis halleri
Araha.49879s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold49879: 12297-13296 Arabidopsis halleri
Araha.49879s0003 2.0kb upstream 2.0kb upstream 5090 true Scaffold49879: 7207-12296 Arabidopsis halleri
Araha.49879s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold49879: 7207-9206 Arabidopsis halleri
Araha.49879s0003 2.0kb downstream 2.0kb downstream 5090 true Scaffold49879: 9207-14296 Arabidopsis halleri
Araha.49879s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold49879: 12297-14296 Arabidopsis halleri
Araha.49879s0003 5.0kb upstream 5.0kb upstream 8090 true Scaffold49879: 4207-12296 Arabidopsis halleri
Araha.49879s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold49879: 4207-9206 Arabidopsis halleri
Araha.49879s0003 5.0kb downstream 5.0kb downstream 8090 true Scaffold49879: 9207-17296 Arabidopsis halleri
Araha.49879s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold49879: 12297-17296 Arabidopsis halleri
Araha.49879s0003 10.0kb upstream 10.0kb upstream 12296 true Scaffold49879: 1-12296 Arabidopsis halleri
Araha.49879s0003 10.0kb upstream 10.0kb upstream 9206 false Scaffold49879: 1-9206 Arabidopsis halleri
Araha.49879s0003 10.0kb downstream 10.0kb downstream 13090 true Scaffold49879: 9207-22296 Arabidopsis halleri
Araha.49879s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold49879: 12297-22296 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370981 5261 Brassicaceae View MSA
123833154 5264 Brassicales-Malvales View MSA
124321850 5266 SBM View MSA
124238866 5268 Malvidae View MSA
124066896 5270 Rosid View MSA
123737792 5271 Pentapetalae View MSA
122788596 5272 Eudicot View MSA
122045303 5273 Angiosperm View MSA
121343824 5274 Embryophyte View MSA
123426537 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain