Gene : Araha.49751s0001 A. halleri v1.1
Defline:  (1 of 3) 5.4.99.5 - Chorismate mutase / Hydroxyphenylpyruvate synthase Genomic Order:  1
Name:  ? Araha.49751s0001 Secondary Identifier:  ? PAC:28851021
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-3461 Arabidopsis halleri pathologic  
Ahalleri PWY-3462 Arabidopsis halleri pathologic  
Ahalleri PWY-3481 Arabidopsis halleri pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.49751s0001 0.5kb upstream 0.5kb upstream 2398 true Scaffold49751: 6355-8752 Arabidopsis halleri
Araha.49751s0001 0.5kb upstream 0.5kb upstream 432 false Scaffold49751: 8321-8752 Arabidopsis halleri
Araha.49751s0001 0.5kb downstream 0.5kb downstream 2466 true Scaffold49751: 5855-8320 Arabidopsis halleri
Araha.49751s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold49751: 5855-6354 Arabidopsis halleri
Araha.49751s0001 1.0kb upstream 1.0kb upstream 2398 true Scaffold49751: 6355-8752 Arabidopsis halleri
Araha.49751s0001 1.0kb upstream 1.0kb upstream 432 false Scaffold49751: 8321-8752 Arabidopsis halleri
Araha.49751s0001 1.0kb downstream 1.0kb downstream 2966 true Scaffold49751: 5355-8320 Arabidopsis halleri
Araha.49751s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold49751: 5355-6354 Arabidopsis halleri
Araha.49751s0001 2.0kb upstream 2.0kb upstream 2398 true Scaffold49751: 6355-8752 Arabidopsis halleri
Araha.49751s0001 2.0kb upstream 2.0kb upstream 432 false Scaffold49751: 8321-8752 Arabidopsis halleri
Araha.49751s0001 2.0kb downstream 2.0kb downstream 3966 true Scaffold49751: 4355-8320 Arabidopsis halleri
Araha.49751s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold49751: 4355-6354 Arabidopsis halleri
Araha.49751s0001 5.0kb upstream 5.0kb upstream 2398 true Scaffold49751: 6355-8752 Arabidopsis halleri
Araha.49751s0001 5.0kb upstream 5.0kb upstream 432 false Scaffold49751: 8321-8752 Arabidopsis halleri
Araha.49751s0001 5.0kb downstream 5.0kb downstream 6966 true Scaffold49751: 1355-8320 Arabidopsis halleri
Araha.49751s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold49751: 1355-6354 Arabidopsis halleri
Araha.49751s0001 10.0kb upstream 10.0kb upstream 2398 true Scaffold49751: 6355-8752 Arabidopsis halleri
Araha.49751s0001 10.0kb upstream 10.0kb upstream 432 false Scaffold49751: 8321-8752 Arabidopsis halleri
Araha.49751s0001 10.0kb downstream 10.0kb downstream 8320 true Scaffold49751: 1-8320 Arabidopsis halleri
Araha.49751s0001 10.0kb downstream 10.0kb downstream 6354 false Scaffold49751: 1-6354 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041201 5273 Angiosperm View MSA
122372904 5261 Brassicaceae View MSA
123828372 5264 Brassicales-Malvales View MSA
124336779 5266 SBM View MSA
124252605 5268 Malvidae View MSA
124071158 5270 Rosid View MSA
123736644 5271 Pentapetalae View MSA
122792454 5272 Eudicot View MSA
121347234 5274 Embryophyte View MSA
123427559 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain