Gene : Araha.51820s0001 A. halleri v1.1

Defline:  (1 of 69) PTHR32410:SF152 - C1 DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  1
Name:  ? Araha.51820s0001 Secondary Identifier:  ? PAC:28848326

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.51820s0001 0.5kb upstream 0.5kb upstream 2683 true Scaffold51820: 785-3467 Arabidopsis halleri
Araha.51820s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold51820: 2968-3467 Arabidopsis halleri
Araha.51820s0001 0.5kb downstream 0.5kb downstream 2683 true Scaffold51820: 285-2967 Arabidopsis halleri
Araha.51820s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold51820: 285-784 Arabidopsis halleri
Araha.51820s0001 1.0kb upstream 1.0kb upstream 3183 true Scaffold51820: 785-3967 Arabidopsis halleri
Araha.51820s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold51820: 2968-3967 Arabidopsis halleri
Araha.51820s0001 1.0kb downstream 1.0kb downstream 2967 true Scaffold51820: 1-2967 Arabidopsis halleri
Araha.51820s0001 1.0kb downstream 1.0kb downstream 784 false Scaffold51820: 1-784 Arabidopsis halleri
Araha.51820s0001 2.0kb upstream 2.0kb upstream 3431 true Scaffold51820: 785-4215 Arabidopsis halleri
Araha.51820s0001 2.0kb upstream 2.0kb upstream 1248 false Scaffold51820: 2968-4215 Arabidopsis halleri
Araha.51820s0001 2.0kb downstream 2.0kb downstream 2967 true Scaffold51820: 1-2967 Arabidopsis halleri
Araha.51820s0001 2.0kb downstream 2.0kb downstream 784 false Scaffold51820: 1-784 Arabidopsis halleri
Araha.51820s0001 5.0kb upstream 5.0kb upstream 3431 true Scaffold51820: 785-4215 Arabidopsis halleri
Araha.51820s0001 5.0kb upstream 5.0kb upstream 1248 false Scaffold51820: 2968-4215 Arabidopsis halleri
Araha.51820s0001 5.0kb downstream 5.0kb downstream 2967 true Scaffold51820: 1-2967 Arabidopsis halleri
Araha.51820s0001 5.0kb downstream 5.0kb downstream 784 false Scaffold51820: 1-784 Arabidopsis halleri
Araha.51820s0001 10.0kb upstream 10.0kb upstream 3431 true Scaffold51820: 785-4215 Arabidopsis halleri
Araha.51820s0001 10.0kb upstream 10.0kb upstream 1248 false Scaffold51820: 2968-4215 Arabidopsis halleri
Araha.51820s0001 10.0kb downstream 10.0kb downstream 2967 true Scaffold51820: 1-2967 Arabidopsis halleri
Araha.51820s0001 10.0kb downstream 10.0kb downstream 784 false Scaffold51820: 1-784 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378889 5261 Brassicaceae View MSA
123841170 5264 Brassicales-Malvales View MSA
124322862 5266 SBM View MSA
124254358 5268 Malvidae View MSA
124070692 5270 Rosid View MSA
123751823 5271 Pentapetalae View MSA
122797568 5272 Eudicot View MSA
122051127 5273 Angiosperm View MSA
121351229 5274 Embryophyte View MSA
123382066 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain