Gene : Araha.52989s0006 A. halleri v1.1
Defline:  (1 of 2) 1.2.1.12//1.2.1.13 - Glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) / Triosephosphate dehydrogenase // Glyceraldehyde-3-phosphate dehydrogenase (NADP(+)) (phosphorylating) / Triosephosphate dehydrogenase (NADP+) Genomic Order:  6
Name:  ? Araha.52989s0006 Secondary Identifier:  ? PAC:28842158
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Sequence Feature Displayer

Ontology Annotation Displayer

8 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri ANAEROFRUCAT-PWY Arabidopsis halleri pathologic  
Ahalleri ANAGLYCOLYSIS-PWY Arabidopsis halleri pathologic  
Ahalleri CALVIN-PWY Arabidopsis halleri pathologic  
Ahalleri GLUCONEO-PWY Arabidopsis halleri pathologic  
Ahalleri PHOTOALL-PWY Arabidopsis halleri pathologic  
Ahalleri PWY-1042 Arabidopsis halleri pathologic  
Ahalleri PWY-5464 Arabidopsis halleri pathologic  
Ahalleri SUCSYN-PWY Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.52989s0006 0.5kb upstream 0.5kb upstream 2413 true Scaffold52989: 12463-14875 Arabidopsis halleri
Araha.52989s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold52989: 14376-14875 Arabidopsis halleri
Araha.52989s0006 0.5kb downstream 0.5kb downstream 2413 true Scaffold52989: 11963-14375 Arabidopsis halleri
Araha.52989s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold52989: 11963-12462 Arabidopsis halleri
Araha.52989s0006 1.0kb upstream 1.0kb upstream 2913 true Scaffold52989: 12463-15375 Arabidopsis halleri
Araha.52989s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold52989: 14376-15375 Arabidopsis halleri
Araha.52989s0006 1.0kb downstream 1.0kb downstream 2913 true Scaffold52989: 11463-14375 Arabidopsis halleri
Araha.52989s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold52989: 11463-12462 Arabidopsis halleri
Araha.52989s0006 2.0kb upstream 2.0kb upstream 3913 true Scaffold52989: 12463-16375 Arabidopsis halleri
Araha.52989s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold52989: 14376-16375 Arabidopsis halleri
Araha.52989s0006 2.0kb downstream 2.0kb downstream 3913 true Scaffold52989: 10463-14375 Arabidopsis halleri
Araha.52989s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold52989: 10463-12462 Arabidopsis halleri
Araha.52989s0006 5.0kb upstream 5.0kb upstream 6200 true Scaffold52989: 12463-18662 Arabidopsis halleri
Araha.52989s0006 5.0kb upstream 5.0kb upstream 4287 false Scaffold52989: 14376-18662 Arabidopsis halleri
Araha.52989s0006 5.0kb downstream 5.0kb downstream 6913 true Scaffold52989: 7463-14375 Arabidopsis halleri
Araha.52989s0006 5.0kb downstream 5.0kb downstream 5000 false Scaffold52989: 7463-12462 Arabidopsis halleri
Araha.52989s0006 10.0kb upstream 10.0kb upstream 6200 true Scaffold52989: 12463-18662 Arabidopsis halleri
Araha.52989s0006 10.0kb upstream 10.0kb upstream 4287 false Scaffold52989: 14376-18662 Arabidopsis halleri
Araha.52989s0006 10.0kb downstream 10.0kb downstream 11913 true Scaffold52989: 2463-14375 Arabidopsis halleri
Araha.52989s0006 10.0kb downstream 10.0kb downstream 10000 false Scaffold52989: 2463-12462 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360412 5261 Brassicaceae View MSA
123837960 5264 Brassicales-Malvales View MSA
124344179 5266 SBM View MSA
124254162 5268 Malvidae View MSA
124061607 5270 Rosid View MSA
123737488 5271 Pentapetalae View MSA
122795007 5272 Eudicot View MSA
122045489 5273 Angiosperm View MSA
121346351 5274 Embryophyte View MSA
123425156 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain