Gene : Araha.50608s0001 A. halleri v1.1

Genomic Order:  1 Name:  ? Araha.50608s0001
Secondary Identifier:  ? PAC:28851825

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.50608s0001 0.5kb upstream 0.5kb upstream 1265 true Scaffold50608: 9799-11063 Arabidopsis halleri
Araha.50608s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold50608: 9799-10298 Arabidopsis halleri
Araha.50608s0001 0.5kb downstream 0.5kb downstream 814 true Scaffold50608: 10299-11112 Arabidopsis halleri
Araha.50608s0001 0.5kb downstream 0.5kb downstream 49 false Scaffold50608: 11064-11112 Arabidopsis halleri
Araha.50608s0001 1.0kb upstream 1.0kb upstream 1765 true Scaffold50608: 9299-11063 Arabidopsis halleri
Araha.50608s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold50608: 9299-10298 Arabidopsis halleri
Araha.50608s0001 1.0kb downstream 1.0kb downstream 814 true Scaffold50608: 10299-11112 Arabidopsis halleri
Araha.50608s0001 1.0kb downstream 1.0kb downstream 49 false Scaffold50608: 11064-11112 Arabidopsis halleri
Araha.50608s0001 2.0kb upstream 2.0kb upstream 2765 true Scaffold50608: 8299-11063 Arabidopsis halleri
Araha.50608s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold50608: 8299-10298 Arabidopsis halleri
Araha.50608s0001 2.0kb downstream 2.0kb downstream 814 true Scaffold50608: 10299-11112 Arabidopsis halleri
Araha.50608s0001 2.0kb downstream 2.0kb downstream 49 false Scaffold50608: 11064-11112 Arabidopsis halleri
Araha.50608s0001 5.0kb upstream 5.0kb upstream 5765 true Scaffold50608: 5299-11063 Arabidopsis halleri
Araha.50608s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold50608: 5299-10298 Arabidopsis halleri
Araha.50608s0001 5.0kb downstream 5.0kb downstream 814 true Scaffold50608: 10299-11112 Arabidopsis halleri
Araha.50608s0001 5.0kb downstream 5.0kb downstream 49 false Scaffold50608: 11064-11112 Arabidopsis halleri
Araha.50608s0001 10.0kb upstream 10.0kb upstream 10765 true Scaffold50608: 299-11063 Arabidopsis halleri
Araha.50608s0001 10.0kb upstream 10.0kb upstream 10000 false Scaffold50608: 299-10298 Arabidopsis halleri
Araha.50608s0001 10.0kb downstream 10.0kb downstream 814 true Scaffold50608: 10299-11112 Arabidopsis halleri
Araha.50608s0001 10.0kb downstream 10.0kb downstream 49 false Scaffold50608: 11064-11112 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121485856 5273 Angiosperm Singleton cluster - no MSA
122319574 5261 Brassicaceae Singleton cluster - no MSA
123761174 5264 Brassicales-Malvales Singleton cluster - no MSA
124259809 5266 SBM Singleton cluster - no MSA
124116431 5268 Malvidae Singleton cluster - no MSA
123845823 5270 Rosid Singleton cluster - no MSA
123432104 5271 Pentapetalae Singleton cluster - no MSA
122467725 5272 Eudicot Singleton cluster - no MSA
120759250 5274 Embryophyte Singleton cluster - no MSA
122801709 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain