Gene : Araha.54322s0002 A. halleri v1.1

Defline:  (1 of 1) PTHR23042:SF70 - TRANSCRIPTION FACTOR BHLH121 Genomic Order:  2
Name:  ? Araha.54322s0002 Secondary Identifier:  ? PAC:28862045

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.54322s0002 0.5kb upstream 0.5kb upstream 2786 true Scaffold54322: 3198-5983 Arabidopsis halleri
Araha.54322s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold54322: 5484-5983 Arabidopsis halleri
Araha.54322s0002 0.5kb downstream 0.5kb downstream 2786 true Scaffold54322: 2698-5483 Arabidopsis halleri
Araha.54322s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold54322: 2698-3197 Arabidopsis halleri
Araha.54322s0002 1.0kb upstream 1.0kb upstream 3286 true Scaffold54322: 3198-6483 Arabidopsis halleri
Araha.54322s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold54322: 5484-6483 Arabidopsis halleri
Araha.54322s0002 1.0kb downstream 1.0kb downstream 3286 true Scaffold54322: 2198-5483 Arabidopsis halleri
Araha.54322s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold54322: 2198-3197 Arabidopsis halleri
Araha.54322s0002 2.0kb upstream 2.0kb upstream 4286 true Scaffold54322: 3198-7483 Arabidopsis halleri
Araha.54322s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold54322: 5484-7483 Arabidopsis halleri
Araha.54322s0002 2.0kb downstream 2.0kb downstream 4286 true Scaffold54322: 1198-5483 Arabidopsis halleri
Araha.54322s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold54322: 1198-3197 Arabidopsis halleri
Araha.54322s0002 5.0kb upstream 5.0kb upstream 7286 true Scaffold54322: 3198-10483 Arabidopsis halleri
Araha.54322s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold54322: 5484-10483 Arabidopsis halleri
Araha.54322s0002 5.0kb downstream 5.0kb downstream 5483 true Scaffold54322: 1-5483 Arabidopsis halleri
Araha.54322s0002 5.0kb downstream 5.0kb downstream 3197 false Scaffold54322: 1-3197 Arabidopsis halleri
Araha.54322s0002 10.0kb upstream 10.0kb upstream 12286 true Scaffold54322: 3198-15483 Arabidopsis halleri
Araha.54322s0002 10.0kb upstream 10.0kb upstream 10000 false Scaffold54322: 5484-15483 Arabidopsis halleri
Araha.54322s0002 10.0kb downstream 10.0kb downstream 5483 true Scaffold54322: 1-5483 Arabidopsis halleri
Araha.54322s0002 10.0kb downstream 10.0kb downstream 3197 false Scaffold54322: 1-3197 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377301 5261 Brassicaceae View MSA
123828806 5264 Brassicales-Malvales View MSA
124338815 5266 SBM View MSA
124253718 5268 Malvidae View MSA
124070244 5270 Rosid View MSA
123741590 5271 Pentapetalae View MSA
122787176 5272 Eudicot View MSA
122044720 5273 Angiosperm View MSA
121351586 5274 Embryophyte View MSA
123427389 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain