Gene : Araha.55054s0002 A. halleri v1.1
Defline:  (1 of 1) PTHR10655:SF20 - CARBOXYLESTERASE Genomic Order:  2
Name:  ? Araha.55054s0002 Secondary Identifier:  ? PAC:28841727
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-6303 Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.55054s0002 0.5kb upstream 0.5kb upstream 1736 true Scaffold55054: 4860-6595 Arabidopsis halleri
Araha.55054s0002 0.5kb upstream 0.5kb upstream 228 false Scaffold55054: 6368-6595 Arabidopsis halleri
Araha.55054s0002 0.5kb downstream 0.5kb downstream 2008 true Scaffold55054: 4360-6367 Arabidopsis halleri
Araha.55054s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold55054: 4360-4859 Arabidopsis halleri
Araha.55054s0002 1.0kb upstream 1.0kb upstream 1736 true Scaffold55054: 4860-6595 Arabidopsis halleri
Araha.55054s0002 1.0kb upstream 1.0kb upstream 228 false Scaffold55054: 6368-6595 Arabidopsis halleri
Araha.55054s0002 1.0kb downstream 1.0kb downstream 2508 true Scaffold55054: 3860-6367 Arabidopsis halleri
Araha.55054s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold55054: 3860-4859 Arabidopsis halleri
Araha.55054s0002 2.0kb upstream 2.0kb upstream 1736 true Scaffold55054: 4860-6595 Arabidopsis halleri
Araha.55054s0002 2.0kb upstream 2.0kb upstream 228 false Scaffold55054: 6368-6595 Arabidopsis halleri
Araha.55054s0002 2.0kb downstream 2.0kb downstream 3508 true Scaffold55054: 2860-6367 Arabidopsis halleri
Araha.55054s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold55054: 2860-4859 Arabidopsis halleri
Araha.55054s0002 5.0kb upstream 5.0kb upstream 1736 true Scaffold55054: 4860-6595 Arabidopsis halleri
Araha.55054s0002 5.0kb upstream 5.0kb upstream 228 false Scaffold55054: 6368-6595 Arabidopsis halleri
Araha.55054s0002 5.0kb downstream 5.0kb downstream 6367 true Scaffold55054: 1-6367 Arabidopsis halleri
Araha.55054s0002 5.0kb downstream 5.0kb downstream 4859 false Scaffold55054: 1-4859 Arabidopsis halleri
Araha.55054s0002 10.0kb upstream 10.0kb upstream 1736 true Scaffold55054: 4860-6595 Arabidopsis halleri
Araha.55054s0002 10.0kb upstream 10.0kb upstream 228 false Scaffold55054: 6368-6595 Arabidopsis halleri
Araha.55054s0002 10.0kb downstream 10.0kb downstream 6367 true Scaffold55054: 1-6367 Arabidopsis halleri
Araha.55054s0002 10.0kb downstream 10.0kb downstream 4859 false Scaffold55054: 1-4859 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122338338 5261 Brassicaceae View MSA
123778926 5264 Brassicales-Malvales View MSA
124277260 5266 SBM View MSA
124132478 5268 Malvidae View MSA
124073611 5270 Rosid View MSA
123748884 5271 Pentapetalae View MSA
122786681 5272 Eudicot View MSA
122044912 5273 Angiosperm View MSA
121349351 5274 Embryophyte View MSA
123428773 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain