Gene : Araha.56826s0001 A. halleri v1.1
Defline:  (1 of 1) PTHR12725//PTHR12725:SF73 - HALOACID DEHALOGENASE-LIKE HYDROLASE Genomic Order:  1
Name:  ? Araha.56826s0001 Secondary Identifier:  ? PAC:28862304
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-7204 Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.56826s0001 0.5kb upstream 0.5kb upstream 1802 true Scaffold56826: 6-1807 Arabidopsis halleri
Araha.56826s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold56826: 1308-1807 Arabidopsis halleri
Araha.56826s0001 0.5kb downstream 0.5kb downstream 1307 true Scaffold56826: 1-1307 Arabidopsis halleri
Araha.56826s0001 0.5kb downstream 0.5kb downstream 5 false Scaffold56826: 1-5 Arabidopsis halleri
Araha.56826s0001 1.0kb upstream 1.0kb upstream 2302 true Scaffold56826: 6-2307 Arabidopsis halleri
Araha.56826s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold56826: 1308-2307 Arabidopsis halleri
Araha.56826s0001 1.0kb downstream 1.0kb downstream 1307 true Scaffold56826: 1-1307 Arabidopsis halleri
Araha.56826s0001 1.0kb downstream 1.0kb downstream 5 false Scaffold56826: 1-5 Arabidopsis halleri
Araha.56826s0001 2.0kb upstream 2.0kb upstream 3302 true Scaffold56826: 6-3307 Arabidopsis halleri
Araha.56826s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold56826: 1308-3307 Arabidopsis halleri
Araha.56826s0001 2.0kb downstream 2.0kb downstream 1307 true Scaffold56826: 1-1307 Arabidopsis halleri
Araha.56826s0001 2.0kb downstream 2.0kb downstream 5 false Scaffold56826: 1-5 Arabidopsis halleri
Araha.56826s0001 5.0kb upstream 5.0kb upstream 6302 true Scaffold56826: 6-6307 Arabidopsis halleri
Araha.56826s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold56826: 1308-6307 Arabidopsis halleri
Araha.56826s0001 5.0kb downstream 5.0kb downstream 1307 true Scaffold56826: 1-1307 Arabidopsis halleri
Araha.56826s0001 5.0kb downstream 5.0kb downstream 5 false Scaffold56826: 1-5 Arabidopsis halleri
Araha.56826s0001 10.0kb upstream 10.0kb upstream 6821 true Scaffold56826: 6-6826 Arabidopsis halleri
Araha.56826s0001 10.0kb upstream 10.0kb upstream 5519 false Scaffold56826: 1308-6826 Arabidopsis halleri
Araha.56826s0001 10.0kb downstream 10.0kb downstream 1307 true Scaffold56826: 1-1307 Arabidopsis halleri
Araha.56826s0001 10.0kb downstream 10.0kb downstream 5 false Scaffold56826: 1-5 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121488195 5273 Angiosperm Singleton cluster - no MSA
122321927 5261 Brassicaceae Singleton cluster - no MSA
123763522 5264 Brassicales-Malvales Singleton cluster - no MSA
124262157 5266 SBM Singleton cluster - no MSA
124118776 5268 Malvidae Singleton cluster - no MSA
123848166 5270 Rosid Singleton cluster - no MSA
123434446 5271 Pentapetalae Singleton cluster - no MSA
122470066 5272 Eudicot Singleton cluster - no MSA
120761584 5274 Embryophyte Singleton cluster - no MSA
122804027 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain