Gene : Araha.63430s0001 A. halleri v1.1

Defline:  (1 of 3) PTHR11760:SF20 - 40S RIBOSOMAL PROTEIN S3-1-RELATED Genomic Order:  1
Name:  ? Araha.63430s0001 Secondary Identifier:  ? PAC:28851464

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.63430s0001 0.5kb upstream 0.5kb upstream 1552 true Scaffold63430: 2-1553 Arabidopsis halleri
Araha.63430s0001 0.5kb upstream 0.5kb upstream 2 false Scaffold63430: 1552-1553 Arabidopsis halleri
Araha.63430s0001 0.5kb downstream 0.5kb downstream 1551 true Scaffold63430: 1-1551 Arabidopsis halleri
Araha.63430s0001 0.5kb downstream 0.5kb downstream 1 false Scaffold63430: 1-1 Arabidopsis halleri
Araha.63430s0001 1.0kb upstream 1.0kb upstream 1552 true Scaffold63430: 2-1553 Arabidopsis halleri
Araha.63430s0001 1.0kb upstream 1.0kb upstream 2 false Scaffold63430: 1552-1553 Arabidopsis halleri
Araha.63430s0001 1.0kb downstream 1.0kb downstream 1551 true Scaffold63430: 1-1551 Arabidopsis halleri
Araha.63430s0001 1.0kb downstream 1.0kb downstream 1 false Scaffold63430: 1-1 Arabidopsis halleri
Araha.63430s0001 2.0kb upstream 2.0kb upstream 1552 true Scaffold63430: 2-1553 Arabidopsis halleri
Araha.63430s0001 2.0kb upstream 2.0kb upstream 2 false Scaffold63430: 1552-1553 Arabidopsis halleri
Araha.63430s0001 2.0kb downstream 2.0kb downstream 1551 true Scaffold63430: 1-1551 Arabidopsis halleri
Araha.63430s0001 2.0kb downstream 2.0kb downstream 1 false Scaffold63430: 1-1 Arabidopsis halleri
Araha.63430s0001 5.0kb upstream 5.0kb upstream 1552 true Scaffold63430: 2-1553 Arabidopsis halleri
Araha.63430s0001 5.0kb upstream 5.0kb upstream 2 false Scaffold63430: 1552-1553 Arabidopsis halleri
Araha.63430s0001 5.0kb downstream 5.0kb downstream 1551 true Scaffold63430: 1-1551 Arabidopsis halleri
Araha.63430s0001 5.0kb downstream 5.0kb downstream 1 false Scaffold63430: 1-1 Arabidopsis halleri
Araha.63430s0001 10.0kb upstream 10.0kb upstream 1552 true Scaffold63430: 2-1553 Arabidopsis halleri
Araha.63430s0001 10.0kb upstream 10.0kb upstream 2 false Scaffold63430: 1552-1553 Arabidopsis halleri
Araha.63430s0001 10.0kb downstream 10.0kb downstream 1551 true Scaffold63430: 1-1551 Arabidopsis halleri
Araha.63430s0001 10.0kb downstream 10.0kb downstream 1 false Scaffold63430: 1-1 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343444 5261 Brassicaceae View MSA
123840317 5264 Brassicales-Malvales View MSA
124349099 5266 SBM View MSA
124252771 5268 Malvidae View MSA
124071878 5270 Rosid View MSA
123743530 5271 Pentapetalae View MSA
122790634 5272 Eudicot View MSA
122043820 5273 Angiosperm View MSA
121347963 5274 Embryophyte View MSA
123426422 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain