Gene : Araha.65472s0002 A. halleri v1.1

Defline:  (1 of 1) PTHR15052:SF2 - GENERAL TRANSCRIPTION FACTOR 3C POLYPEPTIDE 2 Genomic Order:  2
Name:  ? Araha.65472s0002 Secondary Identifier:  ? PAC:28842185

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.65472s0002 0.5kb upstream 0.5kb upstream 5553 true Scaffold65472: 2295-7847 Arabidopsis halleri
Araha.65472s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold65472: 7348-7847 Arabidopsis halleri
Araha.65472s0002 0.5kb downstream 0.5kb downstream 5553 true Scaffold65472: 1795-7347 Arabidopsis halleri
Araha.65472s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold65472: 1795-2294 Arabidopsis halleri
Araha.65472s0002 1.0kb upstream 1.0kb upstream 6053 true Scaffold65472: 2295-8347 Arabidopsis halleri
Araha.65472s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold65472: 7348-8347 Arabidopsis halleri
Araha.65472s0002 1.0kb downstream 1.0kb downstream 6053 true Scaffold65472: 1295-7347 Arabidopsis halleri
Araha.65472s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold65472: 1295-2294 Arabidopsis halleri
Araha.65472s0002 2.0kb upstream 2.0kb upstream 7053 true Scaffold65472: 2295-9347 Arabidopsis halleri
Araha.65472s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold65472: 7348-9347 Arabidopsis halleri
Araha.65472s0002 2.0kb downstream 2.0kb downstream 7053 true Scaffold65472: 295-7347 Arabidopsis halleri
Araha.65472s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold65472: 295-2294 Arabidopsis halleri
Araha.65472s0002 5.0kb upstream 5.0kb upstream 7436 true Scaffold65472: 2295-9730 Arabidopsis halleri
Araha.65472s0002 5.0kb upstream 5.0kb upstream 2383 false Scaffold65472: 7348-9730 Arabidopsis halleri
Araha.65472s0002 5.0kb downstream 5.0kb downstream 7347 true Scaffold65472: 1-7347 Arabidopsis halleri
Araha.65472s0002 5.0kb downstream 5.0kb downstream 2294 false Scaffold65472: 1-2294 Arabidopsis halleri
Araha.65472s0002 10.0kb upstream 10.0kb upstream 7436 true Scaffold65472: 2295-9730 Arabidopsis halleri
Araha.65472s0002 10.0kb upstream 10.0kb upstream 2383 false Scaffold65472: 7348-9730 Arabidopsis halleri
Araha.65472s0002 10.0kb downstream 10.0kb downstream 7347 true Scaffold65472: 1-7347 Arabidopsis halleri
Araha.65472s0002 10.0kb downstream 10.0kb downstream 2294 false Scaffold65472: 1-2294 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026858 5273 Angiosperm View MSA
122373820 5261 Brassicaceae View MSA
123833047 5264 Brassicales-Malvales View MSA
124336665 5266 SBM View MSA
124250917 5268 Malvidae View MSA
124063805 5270 Rosid View MSA
123737128 5271 Pentapetalae View MSA
122794531 5272 Eudicot View MSA
121347438 5274 Embryophyte View MSA
123380552 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain