Gene : Araha.68411s0001 A. halleri v1.1
Defline:  (1 of 1) PTHR12161:SF23 - REGULATOR OF VPS4 ACTIVITY IN THE MVB PATHWAY PROTEIN Genomic Order:  1
Name:  ? Araha.68411s0001 Secondary Identifier:  ? PAC:28837862
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.68411s0001 0.5kb upstream 0.5kb upstream 1904 true Scaffold68411: 1-1904 Arabidopsis halleri
Araha.68411s0001 0.5kb upstream 0.5kb upstream 158 false Scaffold68411: 1-158 Arabidopsis halleri
Araha.68411s0001 0.5kb downstream 0.5kb downstream 2246 true Scaffold68411: 159-2404 Arabidopsis halleri
Araha.68411s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold68411: 1905-2404 Arabidopsis halleri
Araha.68411s0001 1.0kb upstream 1.0kb upstream 1904 true Scaffold68411: 1-1904 Arabidopsis halleri
Araha.68411s0001 1.0kb upstream 1.0kb upstream 158 false Scaffold68411: 1-158 Arabidopsis halleri
Araha.68411s0001 1.0kb downstream 1.0kb downstream 2746 true Scaffold68411: 159-2904 Arabidopsis halleri
Araha.68411s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold68411: 1905-2904 Arabidopsis halleri
Araha.68411s0001 2.0kb upstream 2.0kb upstream 1904 true Scaffold68411: 1-1904 Arabidopsis halleri
Araha.68411s0001 2.0kb upstream 2.0kb upstream 158 false Scaffold68411: 1-158 Arabidopsis halleri
Araha.68411s0001 2.0kb downstream 2.0kb downstream 3726 true Scaffold68411: 159-3884 Arabidopsis halleri
Araha.68411s0001 2.0kb downstream 2.0kb downstream 1980 false Scaffold68411: 1905-3884 Arabidopsis halleri
Araha.68411s0001 5.0kb upstream 5.0kb upstream 1904 true Scaffold68411: 1-1904 Arabidopsis halleri
Araha.68411s0001 5.0kb upstream 5.0kb upstream 158 false Scaffold68411: 1-158 Arabidopsis halleri
Araha.68411s0001 5.0kb downstream 5.0kb downstream 3726 true Scaffold68411: 159-3884 Arabidopsis halleri
Araha.68411s0001 5.0kb downstream 5.0kb downstream 1980 false Scaffold68411: 1905-3884 Arabidopsis halleri
Araha.68411s0001 10.0kb upstream 10.0kb upstream 1904 true Scaffold68411: 1-1904 Arabidopsis halleri
Araha.68411s0001 10.0kb upstream 10.0kb upstream 158 false Scaffold68411: 1-158 Arabidopsis halleri
Araha.68411s0001 10.0kb downstream 10.0kb downstream 3726 true Scaffold68411: 159-3884 Arabidopsis halleri
Araha.68411s0001 10.0kb downstream 10.0kb downstream 1980 false Scaffold68411: 1905-3884 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361971 5261 Brassicaceae View MSA
123841424 5264 Brassicales-Malvales View MSA
124337126 5266 SBM View MSA
124241969 5268 Malvidae View MSA
124066653 5270 Rosid View MSA
123752989 5271 Pentapetalae View MSA
122793014 5272 Eudicot View MSA
122045384 5273 Angiosperm View MSA
121350449 5274 Embryophyte View MSA
123424640 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain