Protein Domain : IPR006219

Type:  Family Name:  DHAP synthase, class 1
Description:  Members of this group catalyze the first enzymatic reaction of the shikimate pathway. The common (shikimate) pathway links metabolism of carbohydrates to biosynthesis of aromatic amino acids phenylalanine, tyrosine, tryptophan, and derivatives in microorganisms and in plants. In a sequence of seven enzymatic reactions, D-erythrose 4-phosphate (E4P), an intermediate of the pentose phosphate pathway, and phosphoenol pyruvate (PEP), a glycolytic intermediate, are converted to chorismate. The pathway begins with the stereospecific condensation of E4P and PEP to yield 7-phospho 2-dehydro 3-deoxy-D-arabino-heptulosonate (DAHP), catalyzed by 3-deoxy-7-phosphoheptulonate synthase (DAHPS) (). The divalent metal cation requirement of this enzyme can be satisfied by a broad range of metals []. A Cys residue in a Cys-X-X-His motif has been identified as part of a metal binding site []. In Escherichia coli, the enzyme exists in three isoforms, each specifically inhibited by one of the three aromatic amino acids.DAHP synthetases fall into two classes, class I (represented by this entry) and class II (represented by ). Class I was believed to be limited to microorganisms and class II to plants. However, a more recent study showed that class II also contains enzymes from a microbial eukaryote and several bacteria []. Brick and Woodard [] proposed that the difference between the two classes lies in their metal ion requirement for activity. Whereas class I requires no metal cation, class II is dependent on a metal cation for activity. However, recently a class I DAHP synthase from Thermotoga maritimahas been purified, characterised, and shown to be a metalloenzyme [].The three-dimentional structures of DAHP synthases have been determined [, , , , ]. The DAHPS(Phe) monomer is a (beta/alpha)8 barrel with an additional N-terminal beta strand and helices and an extra beta sheet near the C terminus []. The active site is located in a cleft at the carboxyl end of the barrel []. The allosteric feedback inhibition binding site of DAHPS(Phe) is composed of residues from two adjacent subunits of a tight dimer and is at least 20 angstroms away from the closest active site [].The absence of the shikimate pathway in animals makes it an attractive target for nontoxic herbicidal, antimicrobial, and antifungal agents. The nontoxic herbicide glyphosphate competitively inhibits 3-phosphoshikimate 1-carboxyvinyltransferase, the sixth enzymatic reaction of the pathway. Short Name:  DHAP_synth_1

0 Child Features

0 Contains

3 Cross Referencess

Identifier
PTHR21225
PIRSF001361
TIGR00034

0 Found In

2 GO Annotations

GO Term Gene Name
GO:0003849 IPR006219
GO:0009073 IPR006219

2 Ontology Annotations

GO Term Gene Name
GO:0003849 IPR006219
GO:0009073 IPR006219

0 Parent Features

28 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
Araha.11756s0345.1.p PAC:28856326 Arabidopsis halleri 348  
Brdisv1pangenome1005599m.p PAC:33635563 Brachypodium distachyon Pangenome 362  
Brdisv1pangenome1006390m.p PAC:33635619 Brachypodium distachyon Pangenome 348  
Brdisv1pangenome1006162m.p PAC:33599092 Brachypodium distachyon Pangenome 348  
Brdisv1pangenome1006898m.p PAC:33619707 Brachypodium distachyon Pangenome 303  
Brdisv1pangenome1007067m.p PAC:33641079 Brachypodium distachyon Pangenome 348  
Brdisv1pangenome1007837m.p PAC:33641355 Brachypodium distachyon Pangenome 348  
Brdisv1pangenome1008682m.p PAC:33657090 Brachypodium distachyon Pangenome 358  
Brdisv1pangenome1008943m.p PAC:33656564 Brachypodium distachyon Pangenome 380  
Brdisv1pangenome1009970m.p PAC:33619355 Brachypodium distachyon Pangenome 355  
Brdisv1pangenome1009499m.p PAC:33619317 Brachypodium distachyon Pangenome 362  
Brdisv1pangenome1010504m.p PAC:33640761 Brachypodium distachyon Pangenome 358  
Brdisv1BdTR8i1044319m.p PAC:34242594 Brachypodium distachyon BdTR8i 348  
Brdisv1BdTR11G1044396m.p PAC:34643032 Brachypodium distachyon BdTR11g 348  
Brdisv1BdTR11A1046645m.p PAC:35689165 Brachypodium distachyon BdTR11a 362  
Brdisv1BdTR11A1048777m.p PAC:35697389 Brachypodium distachyon BdTR11a 449  
Brdisv1BdTR11A1049363m.p PAC:35688017 Brachypodium distachyon BdTR11a 222  
Brdisv1BdTR11A1029444m.p PAC:35676805 Brachypodium distachyon BdTR11a 350  
Brdisv1BdTR11A1044716m.p PAC:35690354 Brachypodium distachyon BdTR11a 358  
Brdisv1BdTR11A1042420m.p PAC:35687893 Brachypodium distachyon BdTR11a 475  
Brdisv1BdTR11A1040756m.p PAC:35696192 Brachypodium distachyon BdTR11a 355  
Brdisv1BdTR11A1040465m.p PAC:35697392 Brachypodium distachyon BdTR11a 380  
Brdisv1BdTR11A1041696m.p PAC:35695139 Brachypodium distachyon BdTR11a 350  
Brdisv1BdTR11A1040904m.p PAC:35691630 Brachypodium distachyon BdTR11a 358  
Brdisv1BdTR11A1041867m.p PAC:35696694 Brachypodium distachyon BdTR11a 348  
Brdisv1BdTR11A1037348m.p PAC:35685143 Brachypodium distachyon BdTR11a 378  
Nycol.A03600.1.p PAC:44493684 Nymphaea colorata 348  
Nycol.O01621.1.p PAC:44509665 Nymphaea colorata 354  

10 Publications

First Author Title Year Journal Volume Pages PubMed ID
            8760910
            15012217
            10425687
            12743122
            10926516
            12126632
            12667068
            12540830
            11244581
            1682314