Protein Domain : IPR019978

Type:  Family Name:  Ribosomal protein S17, archaeal
Description:  The ribosomal proteins catalyse ribosome assembly and stabilise the rRNA, tuning the structure of the ribosome for optimal function. Evidence suggests that, in prokaryotes, the peptidyl transferase reaction is performed by the large subunit 23S rRNA, whereas proteins probably have a greater role in eukaryotic ribosomes. Most of the proteins lie close to, or on the surface of, the 30S subunit, arranged peripherally around the rRNA []. The small subunit ribosomal proteins can be categorised as primary binding proteins, which bind directly and independently to 16S rRNA; secondary binding proteins, which display no specific affinity for 16S rRNA, but its assembly is contingent upon the presence of one or more primary binding proteins; and tertiary binding proteins, which require the presence of one or more secondary binding proteins and sometimes other tertiary binding proteins.The small ribosomal subunit protein S17 is known to bind specifically to the 5' end of 16S ribosomal RNA in Escherichia coli(primary rRNA binding protein), and is thought to be involved in the recognition of termination codons. Experimental evidence [] has revealed that S17 has virtually no groups exposed on the ribosomal surface.This entry represents archaeal ribosomal S17 proteins. Short Name:  Ribosomal_S17_archaeal

0 Child Features

1 Contains

DB identifier Type Name
IPR019979 Conserved_site Ribosomal protein S17, conserved site

1 Cross References

Identifier
MF_01345_A

0 Found In

4 GO Annotations

GO Term Gene Name
GO:0003735 IPR019978
GO:0006412 IPR019978
GO:0005622 IPR019978
GO:0005840 IPR019978

4 Ontology Annotations

GO Term Gene Name
GO:0003735 IPR019978
GO:0006412 IPR019978
GO:0005622 IPR019978
GO:0005840 IPR019978

1 Parent Features

DB identifier Type Name
IPR028333 Family Ribosomal protein S17, archaeal/eukaryotic

64 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
Araha.2177s0008.1.p PAC:28857979 Arabidopsis halleri 111  
Araha.2309s0001.1.p PAC:28843980 Arabidopsis halleri 159  
Araha.15294s0003.1.p PAC:28858560 Arabidopsis halleri 160  
Glyma.13G165200.1.p C6SVJ4 PAC:30502890 Glycine max 159  
Glyma.17G105900.1.p I1MU00 PAC:30481979 Glycine max 159  
Brara.A02200.1.p A0A398ARF4 PAC:30640263 Brassica rapa FPsc 159  
Brara.B03705.1.p A0A398AG32 PAC:30609268 Brassica rapa FPsc 159  
Brara.F01642.1.p A0A397Z591 PAC:30629495 Brassica rapa FPsc 159  
Brara.F02607.1.p A0A397Z0Z7 PAC:30629726 Brassica rapa FPsc 159  
Brara.I00599.1.p A0A397XRD0 PAC:30646382 Brassica rapa FPsc 159  
Bostr.27895s0075.1.p PAC:30650430 Boechera stricta 159  
Bostr.7867s0933.1.p PAC:30658072 Boechera stricta 159  
Bostr.10199s0058.1.p PAC:30675790 Boechera stricta 159  
Bostr.18473s0061.1.p PAC:30667176 Boechera stricta 160  
Cre12.g514500.t1.2 A8JHC3 PAC:30792578 Chlamydomonas reinhardtii 156  
SapurV1A.0490s0060.1.p PAC:31400984 Salix purpurea 159  
SapurV1A.1301s0120.1.p PAC:31450488 Salix purpurea 159  
SapurV1A.0033s0180.1.p PAC:31404672 Salix purpurea 159  
Spipo5G0006300 PAC:31518184 Spirodela polyrhiza 159  
Spipo5G0018200 PAC:31517909 Spirodela polyrhiza 159  
evm_27.model.AmTr_v1.0_scaffold00033.103 U5CVW0 PAC:31561852 Amborella trichopoda 160  
evm_27.model.AmTr_v1.0_scaffold00046.6 U5D6Q0 PAC:31553393 Amborella trichopoda 192  
Eucgr.C02730.2.p A0A059CSJ4 PAC:32039319 Eucalyptus grandis 160  
Eucgr.C02730.1.p A0A059CSJ4 PAC:32039318 Eucalyptus grandis 160  
Eucgr.J00035.1.p A0A059A927 PAC:32034748 Eucalyptus grandis 205  
Prupe.7G255900.1.p M5VRB3 PAC:32104123 Prunus persica 159  
Prupe.1G485300.1.p M5XFE0 PAC:32111253 Prunus persica 159  
GSMUA_Achr6P22460_001 PAC:32319404 Musa acuminata 160  
GSMUA_Achr6P35270_001 PAC:32320050 Musa acuminata 159  
Manes.05G058000.1.p A0A2C9VTN5 PAC:32335298 Manihot esculenta 159  

2 Publications

First Author Title Year Journal Volume Pages PubMed ID
            9281425
            9371771